PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
PHvul01G0005550.1 Flavonoid F3H low borderline
PHvul01G0005570.1 Flavonoid F3H medium borderline
PHvul01G0006600.1 Flavonoid F3H medium borderline
PHvul01G0006660.1 Flavonoid F3H medium borderline
PHvul01G0012420.1 Flavonoid F3H low borderline
PHvul01G0012430.1 Flavonoid F3H low borderline
PHvul01G0012440.1 Flavonoid F3H low borderline
PHvul01G0012450.1 Flavonoid F3H low borderline
PHvul01G0018110.1 Flavonoid F3H medium borderline
PHvul01G0024200.1 Flavonoid F3H medium borderline
PHvul02G0004910.1 Flavonoid F3H medium borderline
PHvul02G0005650.1 Flavonoid F3H low borderline
PHvul02G0012010.1 Flavonoid F3H low borderline
PHvul02G0012010.2 Flavonoid F3H low borderline
PHvul02G0012020.1 Flavonoid F3H low borderline
PHvul02G0015000.1 Flavonoid F3H medium borderline
PHvul02G0015310.1 Flavonoid F3H medium borderline
PHvul02G0017310.1 Flavonoid F3H medium borderline
PHvul02G0017310.2 Flavonoid F3H medium borderline
PHvul02G0018200.1 Flavonoid F3H medium borderline
PHvul02G0018250.1 Flavonoid F3H medium borderline
PHvul02G0019130.1 Flavonoid F3H medium borderline
PHvul02G0020930.1 Flavonoid F3H medium borderline
PHvul02G0030310.1 Flavonoid F3H medium borderline
PHvul02G0032620.1 Flavonoid F3H medium borderline
PHvul02G0032620.2 Flavonoid F3H medium borderline
PHvul03G0001260.1 Flavonoid F3H medium borderline
PHvul03G0001270.1 Flavonoid F3H medium borderline
PHvul03G0001400.1 Flavonoid F3H medium borderline
PHvul03G0002090.1 Flavonoid F3H medium borderline
PHvul03G0002090.2 Flavonoid F3H medium borderline
PHvul03G0002090.3 Flavonoid F3H medium borderline
PHvul03G0002100.1 Flavonoid F3H medium borderline
PHvul03G0002110.1 Flavonoid F3H medium borderline
PHvul03G0002120.1 Flavonoid F3H medium borderline
PHvul03G0002120.2 Flavonoid F3H medium borderline
PHvul03G0008290.1 Flavonoid F3H medium borderline
PHvul03G0011880.1 Flavonoid F3H medium borderline
PHvul03G0017400.1 Flavonoid F3H medium borderline
PHvul03G0022620.1 Flavonoid F3H low borderline
PHvul03G0022620.2 Flavonoid F3H low borderline
PHvul03G0024450.1 Flavonoid F3H low borderline
PHvul03G0026660.1 Flavonoid F3H medium borderline
PHvul03G0029800.1 Flavonoid F3H medium borderline
PHvul03G0029800.2 Flavonoid F3H medium borderline
PHvul03G0029810.1 Flavonoid F3H medium borderline
PHvul04G0004540.1 Flavonoid F3H medium borderline
PHvul04G0004540.2 Flavonoid F3H medium borderline
PHvul04G0004540.3 Flavonoid F3H medium borderline
PHvul04G0004540.4 Flavonoid F3H medium borderline