PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
PHvul08G0009960.1 Flavonoid F3H medium borderline
PHvul08G0011620.1 Flavonoid F3H medium borderline
PHvul08G0012580.1 Flavonoid F3H medium borderline
PHvul08G0012580.2 Flavonoid F3H medium borderline
PHvul08G0012590.1 Flavonoid F3H medium borderline
PHvul08G0012590.2 Flavonoid F3H medium borderline
PHvul08G0012610.1 Flavonoid F3H medium borderline
PHvul08G0013560.1 Flavonoid F3H medium borderline
PHvul08G0016530.1 Flavonoid F3H medium borderline
PHvul08G0017920.1 Flavonoid F3H medium borderline
PHvul08G0017930.1 Flavonoid F3H medium borderline
PHvul08G0017940.1 Flavonoid F3H medium borderline
PHvul08G0021770.1 Flavonoid F3H medium borderline
PHvul08G0021780.1 Flavonoid F3H medium borderline
PHvul08G0021810.1 Flavonoid F3H medium borderline
PHvul08G0021810.2 Flavonoid F3H medium borderline
PHvul08G0022740.1 Flavonoid F3H medium borderline
PHvul08G0026170.1 Flavonoid F3H medium borderline
PHvul09G0000340.1 Flavonoid F3H medium borderline
PHvul09G0000350.1 Flavonoid F3H medium borderline
PHvul09G0004470.1 Flavonoid F3H medium borderline
PHvul09G0004470.2 Flavonoid F3H medium borderline
PHvul09G0004470.3 Flavonoid F3H medium borderline
PHvul09G0005360.1 Flavonoid F3H medium borderline
PHvul09G0010000.1 Flavonoid F3H low borderline
PHvul09G0010010.1 Flavonoid F3H low borderline
PHvul09G0010040.1 Flavonoid F3H medium borderline
PHvul09G0013350.1 Flavonoid F3H medium borderline
PHvul09G0013540.1 Flavonoid F3H medium borderline
PHvul09G0015940.1 Flavonoid F3H medium pass
PHvul09G0025200.1 Flavonoid F3H medium borderline
PHvul10G0000030.1 Flavonoid F3H medium borderline
PHvul10G0001490.1 Flavonoid F3H medium borderline
PHvul10G0003540.1 Flavonoid F3H medium borderline
PHvul10G0004130.1 Flavonoid F3H medium borderline
PHvul10G0004130.2 Flavonoid F3H medium borderline
PHvul10G0006810.1 Flavonoid F3H medium borderline
PHvul10G0006830.1 Flavonoid F3H medium borderline
PHvul10G0006830.2 Flavonoid F3H medium borderline
PHvul10G0008690.1 Flavonoid F3H medium borderline
PHvul10G0012060.1 Flavonoid F3H medium borderline
PHvul10G0015340.1 Flavonoid F3H medium borderline
PHvul10G0015350.1 Flavonoid F3H low borderline
PHvul10G0015360.1 Flavonoid F3H low borderline
PHvul11G0003440.1 Flavonoid F3H medium borderline