PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
PHvul03G0018550.1 Alkaloid T3O medium borderline
PHvul03G0020850.1 Alkaloid T3O medium borderline
PHvul03G0021670.1 Alkaloid T3O medium borderline
PHvul03G0021680.1 Alkaloid T3O medium borderline
PHvul03G0026320.1 Alkaloid T3O medium pass
PHvul03G0026320.3 Alkaloid T3O low borderline
PHvul03G0026320.4 Alkaloid T3O medium pass
PHvul03G0026390.1 Alkaloid T3O medium borderline
PHvul03G0026400.1 Alkaloid T3O medium borderline
PHvul03G0028310.1 Alkaloid T3O medium pass
PHvul03G0029700.1 Alkaloid T3O medium pass
PHvul03G0029700.2 Alkaloid T3O medium pass
PHvul04G0000490.1 Alkaloid T3O medium pass
PHvul04G0002460.1 Alkaloid T3O medium borderline
PHvul04G0002480.1 Alkaloid T3O medium borderline
PHvul04G0002490.1 Alkaloid T3O medium borderline
PHvul04G0002500.1 Alkaloid T3O medium borderline
PHvul04G0002520.1 Alkaloid T3O medium borderline
PHvul04G0002530.1 Alkaloid T3O medium borderline
PHvul04G0002550.1 Alkaloid T3O medium borderline
PHvul04G0004530.1 Alkaloid T3O medium pass
PHvul04G0009310.1 Alkaloid T3O medium borderline
PHvul04G0012110.1 Alkaloid T3O medium borderline
PHvul04G0012120.1 Alkaloid T3O medium borderline
PHvul04G0012180.1 Alkaloid T3O medium borderline
PHvul04G0012190.1 Alkaloid T3O medium borderline
PHvul04G0016350.1 Alkaloid T3O medium borderline
PHvul04G0016350.2 Alkaloid T3O medium borderline
PHvul04G0016370.1 Alkaloid T3O medium borderline
PHvul05G0001530.1 Alkaloid T3O medium pass
PHvul05G0005290.1 Alkaloid T3O medium pass
PHvul05G0005310.1 Alkaloid T3O medium pass
PHvul06G0002240.1 Alkaloid T3O medium borderline
PHvul06G0003330.1 Alkaloid T3O medium borderline
PHvul06G0004940.1 Alkaloid T3O medium borderline
PHvul06G0004950.1 Alkaloid T3O medium borderline
PHvul06G0004960.1 Alkaloid T3O medium borderline
PHvul06G0005000.1 Alkaloid T3O medium borderline
PHvul06G0005030.1 Alkaloid T3O medium borderline
PHvul06G0005050.1 Alkaloid T3O medium borderline
PHvul06G0005060.1 Alkaloid T3O medium borderline
PHvul06G0005070.1 Alkaloid T3O medium borderline
PHvul06G0007710.1 Alkaloid T3O medium pass
PHvul06G0007770.1 Alkaloid T3O medium pass
PHvul06G0008050.1 Alkaloid T3O medium pass
PHvul06G0016350.1 Alkaloid T3O low borderline
PHvul06G0021110.1 Alkaloid T3O medium borderline
PHvul06G0021120.1 Alkaloid T3O medium borderline
PHvul06G0021130.1 Alkaloid T3O medium borderline
PHvul07G0005570.1 Alkaloid T3O low borderline