PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
PHvul02G0030940.1 Terpenoid AACT low borderline
PHvul03G0001240.1 Terpenoid AACT medium borderline
PHvul03G0009230.1 Terpenoid AACT medium borderline
PHvul03G0009230.2 Terpenoid AACT medium borderline
PHvul07G0014050.1 Terpenoid AACT low borderline
PHvul07G0022220.1 Terpenoid AACT medium borderline
PHvul08G0016100.1 Terpenoid AACT low borderline
PHvul08G0029020.1 Terpenoid AACT medium borderline
PHvul01G0000930.1 Terpenoid BAHD medium pass
PHvul01G0001560.1 Terpenoid BAHD medium pass
PHvul01G0001560.2 Terpenoid BAHD medium pass
PHvul01G0001560.3 Terpenoid BAHD medium pass
PHvul01G0001700.1 Terpenoid BAHD medium pass
PHvul01G0001700.2 Terpenoid BAHD medium pass
PHvul01G0001960.1 Terpenoid BAHD medium pass
PHvul01G0004670.1 Terpenoid BAHD medium pass
PHvul01G0005500.1 Terpenoid BAHD low borderline
PHvul01G0007390.1 Terpenoid BAHD low borderline
PHvul01G0008720.1 Terpenoid BAHD medium pass
PHvul01G0008820.1 Terpenoid BAHD medium pass
PHvul01G0009460.1 Terpenoid BAHD medium pass
PHvul01G0009470.1 Terpenoid BAHD medium pass
PHvul01G0010030.1 Terpenoid BAHD low borderline
PHvul01G0010180.1 Terpenoid BAHD medium pass
PHvul01G0010180.2 Terpenoid BAHD medium pass
PHvul01G0010580.1 Terpenoid BAHD medium pass
PHvul01G0011540.1 Terpenoid BAHD medium pass
PHvul01G0011550.1 Terpenoid BAHD medium pass
PHvul01G0011740.1 Terpenoid BAHD low borderline
PHvul01G0011750.1 Terpenoid BAHD low borderline
PHvul01G0013380.1 Terpenoid BAHD medium pass
PHvul01G0013380.2 Terpenoid BAHD medium pass
PHvul01G0016080.1 Terpenoid BAHD medium pass
PHvul01G0016080.10 Terpenoid BAHD medium pass
PHvul01G0016080.11 Terpenoid BAHD medium pass
PHvul01G0016080.12 Terpenoid BAHD medium pass
PHvul01G0016080.2 Terpenoid BAHD medium pass
PHvul01G0016080.3 Terpenoid BAHD medium pass
PHvul01G0016080.4 Terpenoid BAHD medium pass
PHvul01G0016080.5 Terpenoid BAHD medium pass
PHvul01G0016080.6 Terpenoid BAHD medium pass
PHvul01G0016080.7 Terpenoid BAHD medium pass
PHvul01G0016080.8 Terpenoid BAHD medium pass
PHvul01G0016080.9 Terpenoid BAHD medium pass
PHvul01G0021620.1 Terpenoid BAHD medium pass
PHvul01G0022920.1 Terpenoid BAHD low borderline
PHvul01G0023870.1 Terpenoid BAHD medium pass
PHvul01G0023880.1 Terpenoid BAHD medium pass
PHvul01G0024280.1 Terpenoid BAHD medium pass
PHvul02G0000080.1 Terpenoid BAHD low borderline