PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul06G0007730.1 Alkaloid CYP80B1 medium borderline
PHvul06G0007740.1 Alkaloid CYP80B1 medium borderline
PHvul06G0007760.1 Alkaloid CYP80B1 medium borderline
PHvul10G0006960.1 Alkaloid CYP80B1 medium borderline
PHvulscaffold_150002070.1 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.10 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.11 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.14 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.15 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.2 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.3 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.4 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.5 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.6 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.7 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.8 Alkaloid CYP80B1 low borderline
PHvulscaffold_150002070.9 Alkaloid CYP80B1 low borderline
PHvul04G0011680.1 Alkaloid CYP80F1 medium borderline
PHvul02G0002270.1 Alkaloid G8O/G8H medium borderline
PHvul02G0012520.1 Alkaloid G8O/G8H medium borderline
PHvul02G0012600.1 Alkaloid G8O/G8H low borderline
PHvul02G0018550.1 Alkaloid G8O/G8H medium borderline
PHvul03G0001150.1 Alkaloid G8O/G8H medium borderline
PHvul04G0008530.1 Alkaloid G8O/G8H medium borderline
PHvul04G0012140.1 Alkaloid G8O/G8H medium borderline
PHvul04G0012150.1 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.1 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.2 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.3 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.4 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.5 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.6 Alkaloid G8O/G8H medium borderline
PHvul06G0005080.7 Alkaloid G8O/G8H medium borderline
PHvul06G0012290.1 Alkaloid G8O/G8H medium borderline
PHvul06G0012300.1 Alkaloid G8O/G8H medium borderline
PHvul08G0019200.1 Alkaloid G8O/G8H medium borderline
PHvul08G0027920.1 Alkaloid G8O/G8H medium borderline
PHvul09G0024980.1 Alkaloid G8O/G8H medium borderline
PHvul09G0025110.1 Alkaloid G8O/G8H medium borderline
PHvul10G0001350.1 Alkaloid G8O/G8H medium borderline
PHvul10G0002180.1 Alkaloid G8O/G8H medium borderline
PHvul10G0007210.1 Alkaloid G8O/G8H medium pass
PHvul11G0001690.1 Alkaloid G8O/G8H medium borderline
PHvul01G0014940.1 Alkaloid GES low borderline
PHvul01G0014960.1 Alkaloid GES low borderline
PHvul01G0014960.2 Alkaloid GES low borderline
PHvul02G0021690.1 Alkaloid GES medium pass
PHvul02G0021690.2 Alkaloid GES medium pass
PHvul02G0021700.1 Alkaloid GES low borderline
PHvul02G0021710.1 Alkaloid GES medium pass