PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul04G0004070.1 Flavonoid UFGT medium pass
PHvul04G0004080.1 Flavonoid UFGT medium pass
PHvul04G0004460.1 Flavonoid UFGT high pass
PHvul04G0004640.1 Flavonoid UFGT medium pass
PHvul04G0004650.1 Flavonoid UFGT high pass
PHvul04G0004660.1 Flavonoid UFGT medium pass
PHvul04G0004670.1 Flavonoid UFGT medium pass
PHvul04G0004680.1 Flavonoid UFGT high pass
PHvul04G0004690.1 Flavonoid UFGT high pass
PHvul04G0004700.1 Flavonoid UFGT high pass
PHvul04G0004710.1 Flavonoid UFGT medium pass
PHvul04G0009860.1 Flavonoid UFGT low borderline
PHvul04G0009860.2 Flavonoid UFGT low borderline
PHvul04G0009860.3 Flavonoid UFGT low borderline
PHvul04G0009860.4 Flavonoid UFGT low borderline
PHvul04G0009860.5 Flavonoid UFGT low borderline
PHvul04G0009860.6 Flavonoid UFGT low borderline
PHvul04G0009860.7 Flavonoid UFGT low borderline
PHvul04G0009920.1 Flavonoid UFGT medium pass
PHvul04G0010420.1 Flavonoid UFGT medium pass
PHvul04G0010430.1 Flavonoid UFGT low borderline
PHvul04G0010430.2 Flavonoid UFGT high pass
PHvul04G0010450.1 Flavonoid UFGT high pass
PHvul04G0014040.1 Flavonoid UFGT medium pass
PHvul04G0014040.2 Flavonoid UFGT medium pass
PHvul04G0014070.1 Flavonoid UFGT medium pass
PHvul04G0014090.1 Flavonoid UFGT medium pass
PHvul04G0014100.1 Flavonoid UFGT medium pass
PHvul05G0000500.1 Flavonoid UFGT high pass
PHvul05G0000510.2 Flavonoid UFGT high pass
PHvul05G0000520.1 Flavonoid UFGT medium pass
PHvul05G0000520.2 Flavonoid UFGT medium pass
PHvul05G0009310.1 Flavonoid UFGT high pass
PHvul05G0009330.1 Flavonoid UFGT high pass
PHvul05G0009340.1 Flavonoid UFGT high pass
PHvul06G0000930.1 Flavonoid UFGT medium pass
PHvul06G0000940.1 Flavonoid UFGT high pass
PHvul06G0001510.1 Flavonoid UFGT high pass
PHvul06G0004530.1 Flavonoid UFGT medium pass
PHvul06G0011040.1 Flavonoid UFGT high pass
PHvul06G0020240.1 Flavonoid UFGT high pass
PHvul06G0020690.1 Flavonoid UFGT medium pass
PHvul06G0020700.1 Flavonoid UFGT high pass
PHvul06G0020710.1 Flavonoid UFGT medium pass
PHvul06G0020990.1 Flavonoid UFGT medium pass
PHvul06G0021000.1 Flavonoid UFGT high pass
PHvul06G0021010.1 Flavonoid UFGT high pass
PHvul07G0002030.1 Flavonoid UFGT medium pass
PHvul07G0002040.1 Flavonoid UFGT medium pass
PHvul07G0002050.1 Flavonoid UFGT medium pass