PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul02G0007560.1 Flavonoid UFGT medium pass
PHvul02G0009340.1 Flavonoid UFGT medium pass
PHvul02G0009500.1 Flavonoid UFGT medium pass
PHvul02G0009670.1 Flavonoid UFGT high pass
PHvul02G0013230.1 Flavonoid UFGT medium pass
PHvul02G0013230.2 Flavonoid UFGT medium pass
PHvul02G0014630.1 Flavonoid UFGT high pass
PHvul02G0014650.1 Flavonoid UFGT high pass
PHvul02G0014660.1 Flavonoid UFGT high pass
PHvul02G0021210.1 Flavonoid UFGT high pass
PHvul02G0021220.1 Flavonoid UFGT high pass
PHvul02G0021230.1 Flavonoid UFGT high pass
PHvul02G0024490.1 Flavonoid UFGT high pass
PHvul03G0002280.1 Flavonoid UFGT medium pass
PHvul03G0003760.1 Flavonoid UFGT medium pass
PHvul03G0004780.1 Flavonoid UFGT high pass
PHvul03G0004790.1 Flavonoid UFGT medium pass
PHvul03G0004800.1 Flavonoid UFGT medium pass
PHvul03G0004810.1 Flavonoid UFGT high pass
PHvul03G0010520.1 Flavonoid UFGT high pass
PHvul03G0010530.1 Flavonoid UFGT medium pass
PHvul03G0010540.1 Flavonoid UFGT high pass
PHvul03G0015060.1 Flavonoid UFGT high pass
PHvul03G0024310.1 Flavonoid UFGT high pass
PHvul03G0029280.1 Flavonoid UFGT high pass
PHvul03G0029290.1 Flavonoid UFGT high pass
PHvul04G0002810.1 Flavonoid UFGT medium pass
PHvul04G0003330.1 Flavonoid UFGT medium pass
PHvul04G0003420.1 Flavonoid UFGT medium pass
PHvul04G0003470.1 Flavonoid UFGT medium pass
PHvul04G0003480.1 Flavonoid UFGT medium pass
PHvul04G0003890.1 Flavonoid UFGT medium pass
PHvul04G0003910.1 Flavonoid UFGT medium pass
PHvul04G0003920.1 Flavonoid UFGT medium pass
PHvul04G0003930.1 Flavonoid UFGT medium pass
PHvul04G0003940.1 Flavonoid UFGT medium pass
PHvul04G0003950.1 Flavonoid UFGT medium pass
PHvul04G0003960.1 Flavonoid UFGT medium pass
PHvul04G0003970.1 Flavonoid UFGT medium pass
PHvul04G0004070.1 Flavonoid UFGT medium pass
PHvul04G0004080.1 Flavonoid UFGT medium pass
PHvul04G0004460.1 Flavonoid UFGT high pass
PHvul04G0004640.1 Flavonoid UFGT medium pass
PHvul04G0004650.1 Flavonoid UFGT high pass
PHvul04G0004660.1 Flavonoid UFGT medium pass
PHvul04G0004670.1 Flavonoid UFGT medium pass
PHvul04G0004680.1 Flavonoid UFGT high pass
PHvul04G0004690.1 Flavonoid UFGT high pass
PHvul04G0004700.1 Flavonoid UFGT high pass
PHvul04G0004710.1 Flavonoid UFGT medium pass