PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul06G0005080.6 Rosmarinic Acid C4H low borderline
PHvul06G0005080.7 Rosmarinic Acid C4H low borderline
PHvul06G0007730.1 Rosmarinic Acid C4H low borderline
PHvul06G0007740.1 Rosmarinic Acid C4H low borderline
PHvul06G0007760.1 Rosmarinic Acid C4H low borderline
PHvul06G0007770.1 Rosmarinic Acid C4H low borderline
PHvul06G0007820.1 Rosmarinic Acid C4H medium pass
PHvul06G0008030.1 Rosmarinic Acid C4H low borderline
PHvul06G0008040.2 Rosmarinic Acid C4H low borderline
PHvul06G0008050.1 Rosmarinic Acid C4H low borderline
PHvul06G0012290.1 Rosmarinic Acid C4H low borderline
PHvul06G0012300.1 Rosmarinic Acid C4H low borderline
PHvul06G0016350.1 Rosmarinic Acid C4H low borderline
PHvul06G0021110.1 Rosmarinic Acid C4H low borderline
PHvul06G0021120.1 Rosmarinic Acid C4H low borderline
PHvul06G0021130.1 Rosmarinic Acid C4H medium pass
PHvul07G0000300.1 Rosmarinic Acid C4H medium pass
PHvul07G0002570.1 Rosmarinic Acid C4H medium pass
PHvul07G0006410.1 Rosmarinic Acid C4H low borderline
PHvul07G0008700.1 Rosmarinic Acid C4H medium pass
PHvul07G0010570.1 Rosmarinic Acid C4H low borderline
PHvul07G0010730.1 Rosmarinic Acid C4H low borderline
PHvul07G0024300.1 Rosmarinic Acid C4H medium pass
PHvul07G0024310.1 Rosmarinic Acid C4H medium pass
PHvul07G0024320.1 Rosmarinic Acid C4H medium pass
PHvul08G0000570.1 Rosmarinic Acid C4H low borderline
PHvul08G0003580.1 Rosmarinic Acid C4H low borderline
PHvul08G0005850.1 Rosmarinic Acid C4H low borderline
PHvul08G0012930.1 Rosmarinic Acid C4H low borderline
PHvul08G0014690.1 Rosmarinic Acid C4H medium pass
PHvul08G0015630.1 Rosmarinic Acid C4H low borderline
PHvul08G0015630.2 Rosmarinic Acid C4H low borderline
PHvul08G0019200.1 Rosmarinic Acid C4H low borderline
PHvul08G0022850.1 Rosmarinic Acid C4H low borderline
PHvul08G0024850.1 Rosmarinic Acid C4H medium pass
PHvul08G0024970.1 Rosmarinic Acid C4H low borderline
PHvul08G0027910.1 Rosmarinic Acid C4H medium pass
PHvul08G0027920.1 Rosmarinic Acid C4H medium pass
PHvul09G0004120.1 Rosmarinic Acid C4H low borderline
PHvul09G0006060.1 Rosmarinic Acid C4H low borderline
PHvul09G0006060.2 Rosmarinic Acid C4H low borderline
PHvul09G0006240.1 Rosmarinic Acid C4H low borderline
PHvul09G0006250.1 Rosmarinic Acid C4H low borderline
PHvul09G0006260.1 Rosmarinic Acid C4H medium pass
PHvul09G0006270.1 Rosmarinic Acid C4H medium pass
PHvul09G0008050.1 Rosmarinic Acid C4H low borderline
PHvul09G0008050.2 Rosmarinic Acid C4H low borderline
PHvul09G0008380.1 Rosmarinic Acid C4H low borderline
PHvul09G0008400.1 Rosmarinic Acid C4H low borderline
PHvul09G0017600.1 Rosmarinic Acid C4H low borderline