PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul03G0007730.1 Phenylpropanoid C4H/CYP73A medium borderline
PHvul04G0012140.1 Phenylpropanoid C4H/CYP73A low borderline
PHvul04G0012150.1 Phenylpropanoid C4H/CYP73A low borderline
PHvul08G0027920.1 Phenylpropanoid C4H/CYP73A medium borderline
PHvul09G0025110.1 Phenylpropanoid C4H/CYP73A low borderline
PHvul01G0000370.1 Phenylpropanoid CAD medium pass
PHvul01G0001270.1 Phenylpropanoid CAD medium borderline
PHvul01G0006480.1 Phenylpropanoid CAD low borderline
PHvul02G0014490.1 Phenylpropanoid CAD medium pass
PHvul02G0014500.1 Phenylpropanoid CAD medium pass
PHvul02G0014510.1 Phenylpropanoid CAD medium pass
PHvul02G0014520.1 Phenylpropanoid CAD medium pass
PHvul02G0021640.1 Phenylpropanoid CAD medium borderline
PHvul02G0021650.1 Phenylpropanoid CAD medium borderline
PHvul02G0021690.1 Phenylpropanoid CAD low borderline
PHvul02G0021690.2 Phenylpropanoid CAD low borderline
PHvul02G0026600.1 Phenylpropanoid CAD medium pass
PHvul02G0027570.1 Phenylpropanoid CAD medium pass
PHvul03G0003030.1 Phenylpropanoid CAD medium pass
PHvul03G0006210.1 Phenylpropanoid CAD low borderline
PHvul03G0029210.1 Phenylpropanoid CAD medium pass
PHvul03G0029220.1 Phenylpropanoid CAD medium pass
PHvul03G0030210.1 Phenylpropanoid CAD medium pass
PHvul04G0001620.1 Phenylpropanoid CAD low borderline
PHvul05G0003390.1 Phenylpropanoid CAD medium borderline
PHvul05G0003400.1 Phenylpropanoid CAD medium borderline
PHvul05G0003410.1 Phenylpropanoid CAD medium borderline
PHvul05G0003420.1 Phenylpropanoid CAD medium borderline
PHvul05G0003430.1 Phenylpropanoid CAD medium borderline
PHvul05G0003440.1 Phenylpropanoid CAD medium borderline
PHvul05G0003450.1 Phenylpropanoid CAD medium borderline
PHvul05G0004820.1 Phenylpropanoid CAD low borderline
PHvul05G0004820.2 Phenylpropanoid CAD low borderline
PHvul05G0008700.1 Phenylpropanoid CAD low borderline
PHvul05G0008700.2 Phenylpropanoid CAD low borderline
PHvul05G0008740.1 Phenylpropanoid CAD medium borderline
PHvul05G0011120.1 Phenylpropanoid CAD medium pass
PHvul05G0011130.1 Phenylpropanoid CAD medium pass
PHvul05G0011130.2 Phenylpropanoid CAD medium pass
PHvul05G0011130.3 Phenylpropanoid CAD medium pass
PHvul05G0011140.1 Phenylpropanoid CAD medium pass
PHvul05G0011160.1 Phenylpropanoid CAD low borderline
PHvul05G0013390.1 Phenylpropanoid CAD medium pass
PHvul05G0013400.1 Phenylpropanoid CAD low borderline
PHvul05G0013410.1 Phenylpropanoid CAD low borderline
PHvul05G0013590.1 Phenylpropanoid CAD low borderline
PHvul05G0013610.1 Phenylpropanoid CAD medium pass
PHvul05G0013620.1 Phenylpropanoid CAD low borderline
PHvul06G0019700.1 Phenylpropanoid CAD low borderline
PHvul06G0019710.1 Phenylpropanoid CAD low borderline