PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul07G0002780.4 Phenylpropanoid CSE medium pass
PHvul07G0009550.1 Phenylpropanoid CSE medium pass
PHvul07G0013260.1 Phenylpropanoid CSE medium pass
PHvul07G0021970.1 Phenylpropanoid CSE medium pass
PHvul09G0000790.1 Phenylpropanoid CSE medium pass
PHvul09G0000800.1 Phenylpropanoid CSE medium pass
PHvul09G0001230.1 Phenylpropanoid CSE medium pass
PHvul09G0001290.1 Phenylpropanoid CSE medium pass
PHvul09G0006920.1 Phenylpropanoid CSE medium pass
PHvul09G0017480.1 Phenylpropanoid CSE medium pass
PHvul09G0023200.1 Phenylpropanoid CSE medium pass
PHvul11G0004320.1 Phenylpropanoid CSE medium pass
PHvul11G0008160.1 Phenylpropanoid CSE medium pass
PHvul11G0012530.1 Phenylpropanoid CSE medium pass
PHvul11G0012560.1 Phenylpropanoid CSE medium pass
PHvul11G0012570.1 Phenylpropanoid CSE medium pass
PHvul11G0012590.1 Phenylpropanoid CSE medium pass
PHvul11G0012600.1 Phenylpropanoid CSE medium pass
PHvul11G0013190.1 Phenylpropanoid CSE medium pass
PHvul11G0013200.1 Phenylpropanoid CSE medium pass
PHvul11G0013390.1 Phenylpropanoid CSE medium pass
PHvul11G0013400.1 Phenylpropanoid CSE medium pass
PHvul11G0013430.1 Phenylpropanoid CSE medium pass
PHvul11G0013450.1 Phenylpropanoid CSE medium pass
PHvul11G0013510.1 Phenylpropanoid CSE medium pass
PHvul11G0013520.1 Phenylpropanoid CSE medium pass
PHvul11G0013590.1 Phenylpropanoid CSE medium pass
PHvul11G0013630.1 Phenylpropanoid CSE medium pass
PHvul11G0013640.1 Phenylpropanoid CSE medium pass
PHvul02G0009980.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul02G0009990.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul02G0031720.1 Phenylpropanoid F5H/CYP84A low borderline
PHvul02G0031720.2 Phenylpropanoid F5H/CYP84A low borderline
PHvul03G0026110.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul06G0007730.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul06G0007740.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul06G0007760.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul06G0007770.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul09G0017600.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul09G0024990.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul10G0002190.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul10G0005130.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul10G0006960.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul11G0021310.1 Phenylpropanoid F5H/CYP84A medium borderline
PHvul01G0004670.1 Phenylpropanoid HCT low borderline
PHvul01G0008720.1 Phenylpropanoid HCT medium pass
PHvul01G0011540.1 Phenylpropanoid HCT medium pass
PHvul01G0011550.1 Phenylpropanoid HCT medium pass
PHvul01G0021620.1 Phenylpropanoid HCT low borderline
PHvul01G0023870.1 Phenylpropanoid HCT low borderline