PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul02G0002500.1 Rosmarinic Acid C4H medium pass
PHvul02G0002510.1 Rosmarinic Acid C4H low borderline
PHvul02G0002950.1 Rosmarinic Acid C4H low borderline
PHvul02G0002950.2 Rosmarinic Acid C4H low borderline
PHvul02G0009450.1 Rosmarinic Acid C4H low borderline
PHvul02G0009980.1 Rosmarinic Acid C4H low borderline
PHvul02G0009990.1 Rosmarinic Acid C4H low borderline
PHvul02G0011190.1 Rosmarinic Acid C4H medium pass
PHvul02G0012230.1 Rosmarinic Acid C4H low borderline
PHvul02G0012520.1 Rosmarinic Acid C4H low borderline
PHvul02G0012610.1 Rosmarinic Acid C4H medium pass
PHvul02G0012620.1 Rosmarinic Acid C4H low borderline
PHvul02G0012620.2 Rosmarinic Acid C4H medium pass
PHvul02G0012620.3 Rosmarinic Acid C4H low borderline
PHvul02G0016560.1 Rosmarinic Acid C4H low borderline
PHvul02G0016760.1 Rosmarinic Acid C4H low borderline
PHvul02G0018550.1 Rosmarinic Acid C4H low borderline
PHvul02G0018560.1 Rosmarinic Acid C4H medium pass
PHvul02G0022430.1 Rosmarinic Acid C4H medium pass
PHvul02G0024870.1 Rosmarinic Acid C4H low borderline
PHvul02G0026130.1 Rosmarinic Acid C4H medium pass
PHvul02G0026140.1 Rosmarinic Acid C4H low borderline
PHvul02G0026150.1 Rosmarinic Acid C4H medium pass
PHvul02G0031470.1 Rosmarinic Acid C4H medium pass
PHvul03G0000080.1 Rosmarinic Acid C4H low borderline
PHvul03G0000150.1 Rosmarinic Acid C4H low borderline
PHvul03G0001000.1 Rosmarinic Acid C4H medium pass
PHvul03G0001010.1 Rosmarinic Acid C4H low borderline
PHvul03G0001020.1 Rosmarinic Acid C4H medium pass
PHvul03G0001030.1 Rosmarinic Acid C4H medium pass
PHvul03G0003380.1 Rosmarinic Acid C4H low borderline
PHvul03G0003380.2 Rosmarinic Acid C4H low borderline
PHvul03G0004090.1 Rosmarinic Acid C4H low borderline
PHvul03G0004200.1 Rosmarinic Acid C4H low borderline
PHvul03G0005290.1 Rosmarinic Acid C4H medium pass
PHvul03G0005300.1 Rosmarinic Acid C4H low borderline
PHvul03G0005310.1 Rosmarinic Acid C4H low borderline
PHvul03G0007470.1 Rosmarinic Acid C4H low borderline
PHvul03G0007730.1 Rosmarinic Acid C4H low borderline
PHvul03G0008620.1 Rosmarinic Acid C4H low borderline
PHvul03G0009040.1 Rosmarinic Acid C4H low borderline
PHvul03G0016380.1 Rosmarinic Acid C4H low borderline
PHvul03G0018550.1 Rosmarinic Acid C4H low borderline
PHvul03G0018790.1 Rosmarinic Acid C4H low borderline
PHvul03G0018790.2 Rosmarinic Acid C4H low borderline
PHvul03G0018790.3 Rosmarinic Acid C4H low borderline
PHvul03G0020820.1 Rosmarinic Acid C4H low borderline
PHvul03G0020850.1 Rosmarinic Acid C4H medium pass
PHvul03G0021670.1 Rosmarinic Acid C4H low borderline
PHvul03G0021680.1 Rosmarinic Acid C4H medium pass