PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul10G0008050.1 Rosmarinic Acid C4H medium pass
PHvul10G0011730.1 Rosmarinic Acid C4H low borderline
PHvul10G0012740.1 Rosmarinic Acid C4H low borderline
PHvul10G0012940.1 Rosmarinic Acid C4H medium pass
PHvul10G0013160.1 Rosmarinic Acid C4H low borderline
PHvul10G0014050.1 Rosmarinic Acid C4H low borderline
PHvul11G0001690.1 Rosmarinic Acid C4H low borderline
PHvul11G0007020.1 Rosmarinic Acid C4H medium pass
PHvul11G0009250.1 Rosmarinic Acid C4H low borderline
PHvul11G0015740.1 Rosmarinic Acid C4H low borderline
PHvul11G0015900.1 Rosmarinic Acid C4H low borderline
PHvul11G0015950.1 Rosmarinic Acid C4H low borderline
PHvul11G0015960.1 Rosmarinic Acid C4H low borderline
PHvul11G0016410.1 Rosmarinic Acid C4H low borderline
PHvul11G0017150.1 Rosmarinic Acid C4H low borderline
PHvul11G0021310.1 Rosmarinic Acid C4H low borderline
PHvulscaffold_11580000330.1 Rosmarinic Acid C4H low borderline
PHvulscaffold_170002440.1 Rosmarinic Acid C4H low borderline
PHvul03G0014760.1 Rosmarinic Acid CPR medium pass
PHvul08G0000490.1 Rosmarinic Acid CPR medium pass
PHvul08G0009670.1 Rosmarinic Acid CPR medium pass
PHvul08G0009680.1 Rosmarinic Acid CPR medium pass
PHvul08G0018330.1 Rosmarinic Acid CPR medium pass
PHvul09G0003600.1 Rosmarinic Acid CPR medium pass
PHvul05G0015780.1 Rosmarinic Acid HPPR medium pass
PHvul10G0008640.1 Rosmarinic Acid HPPR medium pass
PHvul10G0008650.1 Rosmarinic Acid HPPR medium pass
PHvul10G0008670.1 Rosmarinic Acid HPPR medium pass
PHvul10G0008670.2 Rosmarinic Acid HPPR medium pass
PHvul10G0008670.3 Rosmarinic Acid HPPR medium pass
PHvul10G0015010.1 Rosmarinic Acid HPPR medium pass
PHvul11G0007710.1 Rosmarinic Acid HPPR low borderline
PHvul01G0017560.1 Rosmarinic Acid PAL high pass
PHvul01G0017570.1 Rosmarinic Acid PAL high pass
PHvul07G0009710.1 Rosmarinic Acid PAL high pass
PHvul07G0009730.1 Rosmarinic Acid PAL high pass
PHvul07G0013670.1 Rosmarinic Acid PAL high pass
PHvul08G0029130.1 Rosmarinic Acid PAL high pass
PHvul01G0004670.1 Rosmarinic Acid RAS low borderline
PHvul01G0008720.1 Rosmarinic Acid RAS medium pass
PHvul01G0011540.1 Rosmarinic Acid RAS medium pass
PHvul01G0011550.1 Rosmarinic Acid RAS medium pass
PHvul01G0021620.1 Rosmarinic Acid RAS low borderline
PHvul01G0024280.1 Rosmarinic Acid RAS low borderline
PHvul02G0002540.1 Rosmarinic Acid RAS medium pass
PHvul02G0010670.1 Rosmarinic Acid RAS low borderline
PHvul02G0010670.2 Rosmarinic Acid RAS low borderline
PHvul03G0007400.1 Rosmarinic Acid RAS low borderline
PHvul03G0013870.1 Rosmarinic Acid RAS medium pass
PHvul03G0013880.1 Rosmarinic Acid RAS medium pass