PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul06G0002450.2 Steroid SQE medium pass
PHvul06G0002450.3 Steroid SQE medium pass
PHvul06G0002450.4 Steroid SQE medium pass
PHvul06G0019930.1 Steroid SQE medium pass
PHvul09G0010520.1 Steroid SQE low borderline
PHvulscaffold_12190000540.1 Steroid SQE low borderline
PHvul01G0026690.1 Steroid SQS/FDFT1 low borderline
PHvul03G0024720.1 Steroid SQS/FDFT1 low borderline
PHvul05G0011420.1 Steroid SQS/FDFT1 low borderline
PHvul06G0001930.1 Steroid SQS/FDFT1 medium pass
PHvul06G0004010.1 Steroid SQS/FDFT1 low borderline
PHvul08G0019960.1 Steroid SQS/FDFT1 medium pass
PHvul08G0024270.1 Steroid SQS/FDFT1 medium pass
PHvul08G0024270.2 Steroid SQS/FDFT1 medium pass
PHvul11G0004170.1 Steroid SQS/FDFT1 high pass
PHvul11G0004170.2 Steroid SQS/FDFT1 high pass
PHvul11G0004170.3 Steroid SQS/FDFT1 high pass
PHvul11G0015430.1 Steroid SQS/FDFT1 low borderline
PHvul11G0015430.2 Steroid SQS/FDFT1 low borderline
PHvul02G0030940.1 Terpenoid AACT low borderline
PHvul03G0001240.1 Terpenoid AACT medium borderline
PHvul03G0009230.1 Terpenoid AACT medium borderline
PHvul03G0009230.2 Terpenoid AACT medium borderline
PHvul07G0014050.1 Terpenoid AACT low borderline
PHvul07G0022220.1 Terpenoid AACT medium borderline
PHvul08G0016100.1 Terpenoid AACT low borderline
PHvul08G0029020.1 Terpenoid AACT medium borderline
PHvul01G0000930.1 Terpenoid BAHD medium pass
PHvul01G0001560.1 Terpenoid BAHD medium pass
PHvul01G0001560.2 Terpenoid BAHD medium pass
PHvul01G0001560.3 Terpenoid BAHD medium pass
PHvul01G0001700.1 Terpenoid BAHD medium pass
PHvul01G0001700.2 Terpenoid BAHD medium pass
PHvul01G0001960.1 Terpenoid BAHD medium pass
PHvul01G0004670.1 Terpenoid BAHD medium pass
PHvul01G0005500.1 Terpenoid BAHD low borderline
PHvul01G0007390.1 Terpenoid BAHD low borderline
PHvul01G0008720.1 Terpenoid BAHD medium pass
PHvul01G0008820.1 Terpenoid BAHD medium pass
PHvul01G0009460.1 Terpenoid BAHD medium pass
PHvul01G0009470.1 Terpenoid BAHD medium pass
PHvul01G0010030.1 Terpenoid BAHD low borderline
PHvul01G0010180.1 Terpenoid BAHD medium pass
PHvul01G0010180.2 Terpenoid BAHD medium pass
PHvul01G0010580.1 Terpenoid BAHD medium pass
PHvul01G0011540.1 Terpenoid BAHD medium pass
PHvul01G0011550.1 Terpenoid BAHD medium pass
PHvul01G0011740.1 Terpenoid BAHD low borderline
PHvul01G0011750.1 Terpenoid BAHD low borderline
PHvul01G0013380.1 Terpenoid BAHD medium pass