PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul06G0005000.1 Terpenoid CYP71 medium borderline
PHvul06G0005020.1 Terpenoid CYP71 medium borderline
PHvul06G0005030.1 Terpenoid CYP71 medium borderline
PHvul06G0005050.1 Terpenoid CYP71 medium borderline
PHvul06G0005060.1 Terpenoid CYP71 medium borderline
PHvul06G0005070.1 Terpenoid CYP71 medium borderline
PHvul06G0005080.1 Terpenoid CYP71 medium pass
PHvul06G0005080.2 Terpenoid CYP71 medium pass
PHvul06G0005080.3 Terpenoid CYP71 medium pass
PHvul06G0005080.4 Terpenoid CYP71 medium pass
PHvul06G0005080.5 Terpenoid CYP71 medium pass
PHvul06G0005080.6 Terpenoid CYP71 medium pass
PHvul06G0005080.7 Terpenoid CYP71 medium pass
PHvul06G0006660.1 Terpenoid CYP71 medium pass
PHvul06G0021110.1 Terpenoid CYP71 medium borderline
PHvul06G0021120.1 Terpenoid CYP71 medium borderline
PHvul06G0021130.1 Terpenoid CYP71 medium borderline
PHvul07G0000100.1 Terpenoid CYP71 medium pass
PHvul08G0005850.1 Terpenoid CYP71 low borderline
PHvul08G0014690.1 Terpenoid CYP71 medium borderline
PHvul08G0024970.1 Terpenoid CYP71 medium borderline
PHvul08G0027910.1 Terpenoid CYP71 medium borderline
PHvul08G0027920.1 Terpenoid CYP71 medium borderline
PHvul09G0002470.1 Terpenoid CYP71 medium pass
PHvul09G0012390.1 Terpenoid CYP71 medium pass
PHvul10G0007480.1 Terpenoid CYP71 medium pass
PHvul10G0008050.1 Terpenoid CYP71 medium borderline
PHvul11G0002880.1 Terpenoid CYP71 medium pass
PHvul11G0003600.1 Terpenoid CYP71 medium pass
PHvul01G0000880.1 Terpenoid CYP76 medium borderline
PHvul01G0003740.1 Terpenoid CYP76 low borderline
PHvul01G0003740.2 Terpenoid CYP76 low borderline
PHvul01G0011140.1 Terpenoid CYP76 medium borderline
PHvul01G0013640.1 Terpenoid CYP76 medium borderline
PHvul01G0013650.1 Terpenoid CYP76 medium borderline
PHvul01G0013660.1 Terpenoid CYP76 medium borderline
PHvul01G0013680.1 Terpenoid CYP76 low borderline
PHvul01G0013700.1 Terpenoid CYP76 medium borderline
PHvul01G0013710.1 Terpenoid CYP76 medium borderline
PHvul01G0013720.1 Terpenoid CYP76 medium borderline
PHvul01G0018330.1 Terpenoid CYP76 medium borderline
PHvul01G0021290.1 Terpenoid CYP76 low borderline
PHvul01G0021290.2 Terpenoid CYP76 low borderline
PHvul01G0021290.3 Terpenoid CYP76 low borderline
PHvul01G0021290.4 Terpenoid CYP76 low borderline
PHvul01G0021290.5 Terpenoid CYP76 low borderline
PHvul01G0021290.6 Terpenoid CYP76 low borderline
PHvul01G0021290.7 Terpenoid CYP76 low borderline
PHvul01G0024020.1 Terpenoid CYP76 low borderline
PHvul01G0025960.1 Terpenoid CYP76 medium pass