PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul09G0015940.1 Flavonoid F3H medium pass
PHvul09G0025200.1 Flavonoid F3H medium borderline
PHvul10G0000030.1 Flavonoid F3H medium borderline
PHvul10G0001490.1 Flavonoid F3H medium borderline
PHvul10G0003540.1 Flavonoid F3H medium borderline
PHvul10G0004130.1 Flavonoid F3H medium borderline
PHvul10G0004130.2 Flavonoid F3H medium borderline
PHvul10G0006810.1 Flavonoid F3H medium borderline
PHvul10G0006830.1 Flavonoid F3H medium borderline
PHvul10G0006830.2 Flavonoid F3H medium borderline
PHvul10G0008690.1 Flavonoid F3H medium borderline
PHvul10G0012060.1 Flavonoid F3H medium borderline
PHvul10G0015340.1 Flavonoid F3H medium borderline
PHvul10G0015350.1 Flavonoid F3H low borderline
PHvul10G0015360.1 Flavonoid F3H low borderline
PHvul11G0003440.1 Flavonoid F3H medium borderline
PHvul05G0015580.1 Flavonoid FLS low borderline
PHvul10G0014680.1 Flavonoid FLS low borderline
PHvul01G0003740.1 Flavonoid FNS medium borderline
PHvul01G0003740.2 Flavonoid FNS medium borderline
PHvul01G0013680.1 Flavonoid FNS medium borderline
PHvul02G0011190.1 Flavonoid FNS medium borderline
PHvul02G0012520.1 Flavonoid FNS medium borderline
PHvul02G0012600.1 Flavonoid FNS medium pass
PHvul02G0015480.1 Flavonoid FNS medium borderline
PHvul02G0015480.2 Flavonoid FNS medium borderline
PHvul03G0004090.1 Flavonoid FNS medium borderline
PHvul03G0018550.1 Flavonoid FNS medium borderline
PHvul04G0012140.1 Flavonoid FNS medium borderline
PHvul04G0012150.1 Flavonoid FNS medium borderline
PHvul05G0017350.1 Flavonoid FNS medium borderline
PHvul06G0005080.1 Flavonoid FNS medium borderline
PHvul06G0005080.2 Flavonoid FNS medium borderline
PHvul06G0005080.3 Flavonoid FNS medium borderline
PHvul06G0005080.4 Flavonoid FNS medium borderline
PHvul06G0005080.5 Flavonoid FNS medium borderline
PHvul06G0005080.6 Flavonoid FNS medium borderline
PHvul06G0005080.7 Flavonoid FNS medium borderline
PHvul07G0010540.2 Flavonoid FNS low borderline
PHvul08G0027920.1 Flavonoid FNS medium borderline
PHvul09G0008050.1 Flavonoid FNS medium borderline
PHvul09G0008050.2 Flavonoid FNS medium borderline
PHvul09G0010030.1 Flavonoid FNS medium borderline
PHvul09G0025110.1 Flavonoid FNS medium borderline
PHvul10G0005130.1 Flavonoid FNS medium borderline
PHvul10G0013810.1 Flavonoid FNS low borderline
PHvul10G0013810.2 Flavonoid FNS low borderline
PHvul01G0020560.1 Flavonoid IFR low borderline
PHvul01G0022200.1 Flavonoid IFR low borderline
PHvul02G0003270.1 Flavonoid IFR high pass