PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_70186790 Alkaloid TRI/TRII low borderline
Palpscaffold_70188910 Alkaloid TRI/TRII medium pass
Palpscaffold_70190940 Alkaloid TRI/TRII low borderline
Palpscaffold_70191170 Alkaloid TRI/TRII low borderline
Palpscaffold_70192590 Alkaloid TRI/TRII low borderline
Palpscaffold_70207220 Alkaloid TRI/TRII medium pass
Palpscaffold_40091790 Alkaloid TYDC_DDC medium borderline
Palpscaffold_40092320 Alkaloid XMT_MXMT_DXMT low borderline
Palpscaffold_10002560 Flavonoid 4CL medium pass
Palpscaffold_20032200 Flavonoid 4CL low borderline
Palpscaffold_30056130 Flavonoid 4CL low borderline
Palpscaffold_30062070 Flavonoid 4CL low borderline
Palpscaffold_30065610 Flavonoid 4CL low borderline
Palpscaffold_30066910 Flavonoid 4CL low borderline
Palpscaffold_30067350 Flavonoid 4CL low borderline
Palpscaffold_30067370 Flavonoid 4CL medium pass
Palpscaffold_30071890 Flavonoid 4CL medium pass
Palpscaffold_40100130 Flavonoid 4CL medium pass
Palpscaffold_50119260 Flavonoid 4CL low borderline
Palpscaffold_50134270 Flavonoid 4CL low borderline
Palpscaffold_50135140 Flavonoid 4CL low borderline
Palpscaffold_50141780 Flavonoid 4CL medium pass
Palpscaffold_50143840 Flavonoid 4CL low borderline
Palpscaffold_50144380 Flavonoid 4CL medium pass
Palpscaffold_50144910 Flavonoid 4CL low borderline
Palpscaffold_60153520 Flavonoid 4CL medium pass
Palpscaffold_60153880 Flavonoid 4CL low borderline
Palpscaffold_60155610 Flavonoid 4CL medium pass
Palpscaffold_60172170 Flavonoid 4CL medium pass
Palpscaffold_60176400 Flavonoid 4CL medium pass
Palpscaffold_70200850 Flavonoid 4CL low borderline
Palpscaffold_10005300 Flavonoid ANR medium borderline
Palpscaffold_10024570 Flavonoid ANR low borderline
Palpscaffold_50135330 Flavonoid ANR low borderline
Palpscaffold_50135340 Flavonoid ANR low borderline
Palpscaffold_60162930 Flavonoid ANR medium borderline
Palpscaffold_70190700 Flavonoid ANR low borderline
Palpscaffold_20046140 Flavonoid ANS/LDOX medium borderline
Palpscaffold_20046150 Flavonoid ANS/LDOX medium borderline
Palpscaffold_50125420 Flavonoid ANS/LDOX medium borderline
Palpscaffold_70180440 Flavonoid ANS/LDOX medium borderline
Palpscaffold_70206660 Flavonoid ANS/LDOX low borderline
Palpscaffold_110029060 Flavonoid C4H low borderline
Palpscaffold_20034050 Flavonoid C4H low borderline
Palpscaffold_30058750 Flavonoid C4H low borderline
Palpscaffold_50103770 Flavonoid C4H low borderline
Palpscaffold_60150710 Flavonoid C4H medium borderline
Palpscaffold_60150720 Flavonoid C4H medium borderline
Palpscaffold_60150930 Flavonoid C4H medium borderline
Palpscaffold_60150940 Flavonoid C4H medium borderline