PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_20046430 Terpenoid BAHD medium pass
Palpscaffold_20047540 Terpenoid BAHD medium pass
Palpscaffold_210053960 Terpenoid BAHD medium pass
Palpscaffold_30055830 Terpenoid BAHD medium pass
Palpscaffold_30059430 Terpenoid BAHD medium pass
Palpscaffold_30059500 Terpenoid BAHD medium pass
Palpscaffold_30061720 Terpenoid BAHD medium pass
Palpscaffold_30062330 Terpenoid BAHD low borderline
Palpscaffold_30073920 Terpenoid BAHD low borderline
Palpscaffold_40079620 Terpenoid BAHD medium pass
Palpscaffold_40081440 Terpenoid BAHD medium pass
Palpscaffold_40081530 Terpenoid BAHD medium pass
Palpscaffold_40083350 Terpenoid BAHD medium pass
Palpscaffold_40084350 Terpenoid BAHD low borderline
Palpscaffold_40085960 Terpenoid BAHD medium pass
Palpscaffold_40088350 Terpenoid BAHD low borderline
Palpscaffold_40088480 Terpenoid BAHD low borderline
Palpscaffold_40099370 Terpenoid BAHD medium pass
Palpscaffold_40101430 Terpenoid BAHD low borderline
Palpscaffold_50109370 Terpenoid BAHD medium pass
Palpscaffold_50109700 Terpenoid BAHD medium pass
Palpscaffold_50110750 Terpenoid BAHD medium pass
Palpscaffold_50111910 Terpenoid BAHD medium pass
Palpscaffold_50111920 Terpenoid BAHD medium pass
Palpscaffold_50116660 Terpenoid BAHD medium pass
Palpscaffold_50117540 Terpenoid BAHD medium pass
Palpscaffold_50126290 Terpenoid BAHD medium pass
Palpscaffold_50128870 Terpenoid BAHD low borderline
Palpscaffold_50128880 Terpenoid BAHD low borderline
Palpscaffold_50130370 Terpenoid BAHD medium pass
Palpscaffold_50135040 Terpenoid BAHD medium pass
Palpscaffold_50135150 Terpenoid BAHD medium pass
Palpscaffold_50140840 Terpenoid BAHD medium pass
Palpscaffold_60149610 Terpenoid BAHD medium pass
Palpscaffold_60150230 Terpenoid BAHD low borderline
Palpscaffold_60152220 Terpenoid BAHD low borderline
Palpscaffold_60154020 Terpenoid BAHD medium pass
Palpscaffold_60154030 Terpenoid BAHD low borderline
Palpscaffold_60161220 Terpenoid BAHD medium pass
Palpscaffold_60169820 Terpenoid BAHD medium pass
Palpscaffold_60175030 Terpenoid BAHD low borderline
Palpscaffold_60175310 Terpenoid BAHD medium pass
Palpscaffold_60176580 Terpenoid BAHD medium pass
Palpscaffold_70180000 Terpenoid BAHD low borderline
Palpscaffold_70180810 Terpenoid BAHD medium pass
Palpscaffold_70183600 Terpenoid BAHD medium pass
Palpscaffold_70184010 Terpenoid BAHD low borderline
Palpscaffold_70184370 Terpenoid BAHD medium pass
Palpscaffold_70184430 Terpenoid BAHD low borderline
Palpscaffold_70184440 Terpenoid BAHD low borderline