PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_60172570 Terpenoid CYP76 medium pass
Palpscaffold_60173120 Terpenoid CYP76 medium borderline
Palpscaffold_60173130 Terpenoid CYP76 low borderline
Palpscaffold_60175950 Terpenoid CYP76 medium borderline
Palpscaffold_60175970 Terpenoid CYP76 medium borderline
Palpscaffold_60175980 Terpenoid CYP76 medium borderline
Palpscaffold_60175990 Terpenoid CYP76 medium borderline
Palpscaffold_60176230 Terpenoid CYP76 low borderline
Palpscaffold_70187100 Terpenoid CYP76 medium pass
Palpscaffold_70189450 Terpenoid CYP76 medium borderline
Palpscaffold_70192130 Terpenoid CYP76 low borderline
Palpscaffold_70192480 Terpenoid CYP76 medium borderline
Palpscaffold_70197560 Terpenoid CYP76 medium borderline
Palpscaffold_70197760 Terpenoid CYP76 medium pass
Palpscaffold_70201370 Terpenoid CYP76 medium borderline
Palpscaffold_70202810 Terpenoid CYP76 medium pass
Palpscaffold_70202870 Terpenoid CYP76 low borderline
Palpscaffold_70206650 Terpenoid CYP76 medium pass
Palpscaffold_70207110 Terpenoid CYP76 medium pass
Palpscaffold_70211920 Terpenoid CYP76 medium borderline
Palpscaffold_70212060 Terpenoid CYP76 medium borderline
Palpscaffold_70188070 Terpenoid DXR high pass
Palpscaffold_50137190 Terpenoid DXS medium pass
Palpscaffold_50137580 Terpenoid DXS low borderline
Palpscaffold_50137920 Terpenoid DXS medium pass
Palpscaffold_60163290 Terpenoid DXS medium pass
Palpscaffold_60163320 Terpenoid DXS medium pass
Palpscaffold_70203560 Terpenoid DXS medium pass
Palpscaffold_70216240 Terpenoid DXS medium pass
Palpscaffold_50140530 Terpenoid FPPS low borderline
Palpscaffold_70196480 Terpenoid FPPS medium pass
Palpscaffold_20040800 Terpenoid GGPPS medium borderline
Palpscaffold_60175470 Terpenoid GGPPS medium borderline
Palpscaffold_70192780 Terpenoid GGPPS medium borderline
Palpscaffold_70212390 Terpenoid GGPPS medium borderline
Palpscaffold_30075160 Terpenoid GPPS medium borderline
Palpscaffold_10025280 Terpenoid HDR/IspH high pass
Palpscaffold_60171010 Terpenoid HDS/IspG high pass
Palpscaffold_20033630 Terpenoid HMGR medium pass
Palpscaffold_30059860 Terpenoid HMGR low borderline
Palpscaffold_30076320 Terpenoid HMGR medium pass
Palpscaffold_60168390 Terpenoid HMGS low borderline
Palpscaffold_70182980 Terpenoid HMGS high pass
Palpscaffold_10007800 Terpenoid IDI low borderline
Palpscaffold_70204510 Terpenoid IDI low borderline
Palpscaffold_70217820 Terpenoid IDI medium pass
Palpscaffold_70209750 Terpenoid MCT/IspD low borderline
Palpscaffold_60156590 Terpenoid MDS/IspF high pass
Palpscaffold_70191730 Terpenoid MDS/IspF low borderline
Palpscaffold_10006200 Terpenoid MVD low borderline