PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
PtremuloPotrs0195520275380.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0195520275390.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs0195520275400.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0197460278630.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0198540280730.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0198770281140.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0200000284600.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0200330285450.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs0269270293280.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0307850296540.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0310790296930.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0359350305610.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0363530306890.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0367750308050.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0382260313400.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0386720315340.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0386910315380.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0390620317160.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0392110317850.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs0398920321170.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0408950327930.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0414720331720.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0428070342350.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0431100344950.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs1311420348470.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs1453810350390.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs1455520350600.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs1468090352270.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs1479310353590.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs1483050354410.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs1487370354880.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs1491700355810.1.v1.427 Alkaloid 7DLGT low borderline