PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
PtremuloPotrs0000950001560.1.v1.427 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0003820007380.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0006180012250.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0006410012760.2.v1.427 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0006410012770.1.v1.427 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0007680015350.2.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0008250016380.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0008550017470.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0013740029550.2.v1.427 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0016780036440.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0022020046260.2.v1.427 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0032220061310.1.v1.427 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0039150072220.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0039150072230.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0040430073920.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0041160075030.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0042220076620.1.v1.427 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0051090090620.1.v1.427 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
PtremuloPotrs0051940091920.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0055370097120.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0057710100460.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0061710107340.1.v1.427 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
PtremuloPotrs0072600123550.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0076190128960.1.v1.427 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0079330137330.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0081250142330.2.v1.427 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0087760159740.1.v1.427 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0105190191590.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0114270204460.1.v1.427 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0126240212810.1.v1.427 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0132700217480.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0142850224990.1.v1.427 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
PtremuloPotrs0150530229620.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0156770233530.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0178510250990.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0180780253710.2.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0182860256500.2.v1.427 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
PtremuloPotrs0188970264200.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0193280270800.1.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0195160274670.2.v1.427 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PtremuloPotrs0196240276620.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0201010287220.1.v1.427 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
PtremuloPotrs0201540288900.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0341630301850.3.v1.427 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
PtremuloPotrs0345390302570.1.v1.427 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
PtremuloPotrs0346520302780.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0365730307460.1.v1.427 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PtremuloPotrs0377860311490.1.v1.427 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PtremuloPotrs0381330312880.1.v1.427 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
PtremuloPotrs0381330312900.1.v1.427 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH