PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
PtremuloPotrs0020830044320.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
PtremuloPotrs0021850045900.1.v1.427 Phenylpropanoid CCR medium pass CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
PtremuloPotrs0034350064710.1.v1.427 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
PtremuloPotrs0036330067970.1.v1.427 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
PtremuloPotrs0039350072600.1.v1.427 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
PtremuloPotrs0040990074830.1.v1.427 Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
PtremuloPotrs0047250084880.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
PtremuloPotrs0055640097420.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH
PtremuloPotrs0058870102090.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
PtremuloPotrs0060820105840.1.v1.427 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
PtremuloPotrs0083470147850.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
PtremuloPotrs0086670156900.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
PtremuloPotrs0088850163620.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
PtremuloPotrs0111760200830.2.v1.427 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
PtremuloPotrs0122890210190.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
PtremuloPotrs0139560222630.1.v1.427 Phenylpropanoid CCR medium pass CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
PtremuloPotrs0161220236950.1.v1.427 Phenylpropanoid CCR medium pass CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
PtremuloPotrs0164810239390.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
PtremuloPotrs0186450261210.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
PtremuloPotrs0186980261660.1.v1.427 Phenylpropanoid CCR low borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
PtremuloPotrs0192960270140.2.v1.427 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
PtremuloPotrs0195920275960.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
PtremuloPotrs0196120276410.1.v1.427 Phenylpropanoid CCR low borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
PtremuloPotrs0201490288780.1.v1.427 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
PtremuloPotrs0373730310010.1.v1.427 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
PtremuloPotrs1465050351720.1.v1.427 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR