PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
PtremuloPotrs0004900009680.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0005640010990.2.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0009260019120.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0015950034500.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0020600043950.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0021370045060.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0022640047020.2.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0034730065110.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0036480068200.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0038950071930.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0047420085190.3.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0050920090230.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0050920090240.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0056750098870.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0060980106060.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0063820110560.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0064550111410.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0068770117630.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0074880126800.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0076380129380.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0083710148570.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0092380177170.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0094340181490.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0104120190420.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0108240195700.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0109150197230.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0111960201040.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0113980203970.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0134340218780.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0152320230680.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0167440241420.2.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0191790268150.1.v1.427 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PtremuloPotrs0200360285480.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0361010306240.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0402100323380.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs0403310324120.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PtremuloPotrs1450230349870.1.v1.427 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL