PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
PtremuloPotrs0006930013730.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0013250028470.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0016000034590.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0023760049000.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0025450051600.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0028130055410.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0039650073060.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0048940087560.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0050440089610.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0054720096320.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0060920106020.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0063240109690.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0063420110040.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0067710115980.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0071810122410.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0078890135990.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0084400150530.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0090690169810.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0090850170290.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0097440184010.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0105320191940.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0128710214640.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0165550239850.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0167010241060.2.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0172960245280.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0179470252110.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0184230258080.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0188450263580.2.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0192110268640.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0197590279060.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0201930290650.1.v1.427 Rosmarinic Acid RAS low borderline
PtremuloPotrs0311750297030.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0326560298940.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0368440308200.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0383110313780.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs0430840344770.1.v1.427 Rosmarinic Acid RAS medium pass
PtremuloPotrs1457110350760.1.v1.427 Rosmarinic Acid RAS medium pass