PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
PtremuloPotrs0004750009450.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0005800011240.1.v1.427 Alkaloid PYKS medium pass
PtremuloPotrs0005800011250.1.v1.427 Alkaloid PYKS medium pass
PtremuloPotrs0014750031960.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0022130046390.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0025840052260.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0032140061130.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0035690066790.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0035690066800.1.v1.427 Alkaloid PYKS medium pass
PtremuloPotrs0047530085420.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0051070090570.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0059140102620.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0079410137520.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0083700148550.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0089170164740.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0089510165890.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0112970202460.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0118130207090.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0122890210180.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0140740223360.1.v1.427 Alkaloid PYKS medium pass
PtremuloPotrs0158750235120.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0168840242370.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0169700243010.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0176760248990.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0192860269900.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0193380271080.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0198180280090.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0201280287970.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0400440322280.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0408060327490.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0411100329200.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0418610334130.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0419210334620.1.v1.427 Alkaloid PYKS high pass
PtremuloPotrs0428420342700.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs0429560343710.1.v1.427 Alkaloid PYKS low borderline
PtremuloPotrs1481670354200.1.v1.427 Alkaloid PYKS low borderline