PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status Best Target
PtremuloPotrs0004650009030.1.v1.427 Flavonoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
PtremuloPotrs0008420016990.1.v1.427 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0010260021820.1.v1.427 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
PtremuloPotrs0010300022010.1.v1.427 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
PtremuloPotrs0022660047060.2.v1.427 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0032170061240.1.v1.427 Flavonoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
PtremuloPotrs0036490068210.3.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0039510072870.2.v1.427 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
PtremuloPotrs0043420078260.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0043950079310.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0048290086650.1.v1.427 Flavonoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
PtremuloPotrs0056820099070.1.v1.427 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0064950111740.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0069530118980.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0069900119560.1.v1.427 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
PtremuloPotrs0071430121860.1.v1.427 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0072910124000.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0077640132430.1.v1.427 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
PtremuloPotrs0078800135700.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0084320150320.1.v1.427 Flavonoid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
PtremuloPotrs0086280155610.1.v1.427 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
PtremuloPotrs0087870160100.2.v1.427 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0087990160400.1.v1.427 Flavonoid 4CL medium pass 4CL__00007__sp_Q42524_4CL1_ARATH
PtremuloPotrs0088420161930.1.v1.427 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
PtremuloPotrs0090590169390.1.v1.427 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
PtremuloPotrs0091190171770.1.v1.427 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
PtremuloPotrs0096210182880.2.v1.427 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
PtremuloPotrs0106580193460.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0113170202810.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0120500208430.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0175980247930.1.v1.427 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0175980247950.1.v1.427 Flavonoid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
PtremuloPotrs0182410256010.2.v1.427 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
PtremuloPotrs0182460256100.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0194570273310.1.v1.427 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
PtremuloPotrs0198290280220.1.v1.427 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0198720281050.1.v1.427 Flavonoid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
PtremuloPotrs0200200285170.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0201050287420.1.v1.427 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
PtremuloPotrs0201190287760.1.v1.427 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
PtremuloPotrs0201470288630.2.v1.427 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
PtremuloPotrs0309740296820.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0328610299310.1.v1.427 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
PtremuloPotrs0396790320270.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0399540321600.1.v1.427 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
PtremuloPotrs0399800321830.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0411660329660.1.v1.427 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
PtremuloPotrs0422320337420.1.v1.427 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PtremuloPotrs0007680015350.2.v1.427 Flavonoid ANR medium borderline ANR__00001__sp_Q5FB34_ANRCS_VITVI
PtremuloPotrs0008480017380.1.v1.427 Flavonoid ANR medium borderline ANR__00001__sp_Q5FB34_ANRCS_VITVI