PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
PtremuloPotrs0040910074680.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0042140076530.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0042870077620.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0042870077630.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0042870077640.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0044170079570.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs0044790080920.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0049950089000.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0052870093500.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0053160093980.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0054530095970.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0054780096410.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0054950096630.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0058010100810.2.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0058400101480.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0058900102100.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0059070102460.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0059110102530.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0062610108940.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs0065550112730.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0074300126090.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0075860128260.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0076050128760.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0076520129760.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0076720130250.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0079490137860.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0082150144500.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0082830146060.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0083040146660.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0083070146780.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0083070146790.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0083160147120.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0085040152170.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0085040152180.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0087030157870.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0088210161140.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0088330161550.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0088430161970.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0089890167200.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0090930170780.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0091800173940.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0091880174440.1.v1.427 Alkaloid 7DLGT high pass
PtremuloPotrs0092110175830.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0092150175930.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0099220185530.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0099290185600.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0101610187870.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0102910189310.1.v1.427 Alkaloid 7DLGT medium pass
PtremuloPotrs0103470189750.1.v1.427 Alkaloid 7DLGT low borderline
PtremuloPotrs0105130191510.1.v1.427 Alkaloid 7DLGT low borderline