PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
PtremuloPotrs0133240217780.1.v1.427 Alkaloid G8O/G8H low borderline
PtremuloPotrs0133240217840.1.v1.427 Alkaloid G8O/G8H medium borderline
PtremuloPotrs0184260258140.1.v1.427 Alkaloid G8O/G8H medium borderline
PtremuloPotrs0382840313700.1.v1.427 Alkaloid G8O/G8H medium borderline
PtremuloPotrs0000950001560.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0003820007380.1.v1.427 Alkaloid GES low borderline
PtremuloPotrs0008250016380.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0008550017470.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0015100032630.1.v1.427 Alkaloid GES low borderline
PtremuloPotrs0016780036440.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0029500057330.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0042220076620.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0043540078470.1.v1.427 Alkaloid GES low borderline
PtremuloPotrs0051940091920.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0079330137330.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0080480140420.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0086270155580.1.v1.427 Alkaloid GES low borderline
PtremuloPotrs0110590199090.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0130550215860.1.v1.427 Alkaloid GES low borderline
PtremuloPotrs0145590226510.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0157500234030.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0162610237910.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0164760239350.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0193280270800.1.v1.427 Alkaloid GES low borderline
PtremuloPotrs0195160274670.2.v1.427 Alkaloid GES medium pass
PtremuloPotrs0384670314360.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0403090323960.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0408290327630.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0429930343940.1.v1.427 Alkaloid GES medium pass
PtremuloPotrs0006180012250.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0006680013270.2.v1.427 Alkaloid GS low borderline
PtremuloPotrs0025960052470.1.v1.427 Alkaloid GS low borderline
PtremuloPotrs0032220061310.1.v1.427 Alkaloid GS medium pass
PtremuloPotrs0040430073920.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0041160075030.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0044560080480.2.v1.427 Alkaloid GS medium pass
PtremuloPotrs0044560080490.1.v1.427 Alkaloid GS medium pass
PtremuloPotrs0055370097120.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0057710100460.1.v1.427 Alkaloid GS medium pass
PtremuloPotrs0088490162200.1.v1.427 Alkaloid GS low borderline
PtremuloPotrs0089440165660.1.v1.427 Alkaloid GS low borderline
PtremuloPotrs0099300185630.1.v1.427 Alkaloid GS low borderline
PtremuloPotrs0105190191590.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0113820203750.1.v1.427 Alkaloid GS low borderline
PtremuloPotrs0114270204460.1.v1.427 Alkaloid GS medium pass
PtremuloPotrs0126240212810.1.v1.427 Alkaloid GS medium pass
PtremuloPotrs0131520216690.1.v1.427 Alkaloid GS low borderline
PtremuloPotrs0142850224990.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0150530229620.1.v1.427 Alkaloid GS high pass
PtremuloPotrs0156770233530.1.v1.427 Alkaloid GS medium pass