PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ROchi02G0005690.1 Rosmarinic Acid RAS low borderline
ROchi02G0012380.1 Rosmarinic Acid RAS low borderline
ROchi02G0016860.1 Rosmarinic Acid RAS low borderline
ROchi02G0023310.1 Rosmarinic Acid RAS low borderline
ROchi02G0034220.1 Rosmarinic Acid RAS low borderline
ROchi02G0037040.1 Rosmarinic Acid RAS medium pass
ROchi02G0037060.1 Rosmarinic Acid RAS medium pass
ROchi02G0037070.1 Rosmarinic Acid RAS medium pass
ROchi02G0037100.1 Rosmarinic Acid RAS medium pass
ROchi02G0059780.1 Rosmarinic Acid RAS low borderline
ROchi03G0006250.1 Rosmarinic Acid RAS low borderline
ROchi04G0018000.1 Rosmarinic Acid RAS low borderline
ROchi05G0051630.1 Rosmarinic Acid RAS medium pass
ROchi05G0051640.1 Rosmarinic Acid RAS medium pass
ROchi05G0051690.1 Rosmarinic Acid RAS medium pass
ROchi05G0051700.1 Rosmarinic Acid RAS medium pass
ROchi05G0051740.1 Rosmarinic Acid RAS medium pass
ROchi05G0051750.1 Rosmarinic Acid RAS medium pass
ROchi05G0051790.1 Rosmarinic Acid RAS medium pass
ROchi05G0051800.1 Rosmarinic Acid RAS medium pass
ROchi05G0051830.1 Rosmarinic Acid RAS medium pass
ROchi05G0064310.1 Rosmarinic Acid RAS medium pass
ROchi06G0002030.1 Rosmarinic Acid RAS low borderline
ROchi06G0039280.1 Rosmarinic Acid RAS low borderline
ROchi06G0045110.1 Rosmarinic Acid RAS medium pass
ROchi07G0002510.1 Rosmarinic Acid RAS low borderline
ROchi07G0010880.1 Rosmarinic Acid RAS medium pass
ROchi07G0027250.1 Rosmarinic Acid RAS medium pass
ROchi07G0030270.1 Rosmarinic Acid RAS low borderline
ROchi07G0036610.1 Rosmarinic Acid RAS medium pass
ROchi01G0008760.1 Rosmarinic Acid TAT medium pass
ROchi01G0035770.1 Rosmarinic Acid TAT medium pass
ROchi01G0041670.1 Rosmarinic Acid TAT low borderline
ROchi02G0031370.1 Rosmarinic Acid TAT medium pass
ROchi02G0031390.1 Rosmarinic Acid TAT medium pass
ROchi02G0031400.1 Rosmarinic Acid TAT medium pass
ROchi02G0040860.1 Rosmarinic Acid TAT medium pass
ROchi03G0005530.1 Rosmarinic Acid TAT medium pass
ROchi03G0005540.1 Rosmarinic Acid TAT medium pass
ROchi03G0007700.1 Rosmarinic Acid TAT low borderline
ROchi03G0007710.1 Rosmarinic Acid TAT medium pass
ROchi03G0007730.1 Rosmarinic Acid TAT medium pass
ROchi03G0013070.1 Rosmarinic Acid TAT medium pass
ROchi04G0003220.1 Rosmarinic Acid TAT medium pass
ROchi04G0013550.1 Rosmarinic Acid TAT medium pass
ROchi04G0013610.1 Rosmarinic Acid TAT medium pass
ROchi04G0017460.1 Rosmarinic Acid TAT medium pass
ROchi04G0019480.1 Rosmarinic Acid TAT medium pass
ROchi04G0019490.1 Rosmarinic Acid TAT medium pass
ROchi04G0021070.1 Rosmarinic Acid TAT medium pass