PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ROchi07G0023330.1 Rosmarinic Acid C4H low borderline
ROchi07G0025720.1 Rosmarinic Acid C4H medium pass
ROchi07G0025730.1 Rosmarinic Acid C4H low borderline
ROchi07G0026440.1 Rosmarinic Acid C4H low borderline
ROchi07G0028950.1 Rosmarinic Acid C4H low borderline
ROchi07G0030940.1 Rosmarinic Acid C4H low borderline
ROchi07G0032740.1 Rosmarinic Acid C4H low borderline
ROchi07G0033040.1 Rosmarinic Acid C4H low borderline
ROchi07G0033050.1 Rosmarinic Acid C4H low borderline
ROchi07G0033690.1 Rosmarinic Acid C4H low borderline
ROchi07G0033700.1 Rosmarinic Acid C4H low borderline
ROchi07G0035820.1 Rosmarinic Acid C4H low borderline
ROchi07G0036380.1 Rosmarinic Acid C4H medium pass
ROchi07G0036460.1 Rosmarinic Acid C4H medium pass
ROchi07G0037250.1 Rosmarinic Acid C4H low borderline
ROchi07G0040980.1 Rosmarinic Acid C4H low borderline
ROchi07G0041060.1 Rosmarinic Acid C4H medium pass
ROchi07G0045210.1 Rosmarinic Acid C4H low borderline
ROchi07G0045290.1 Rosmarinic Acid C4H low borderline
ROchi00G0006000.1 Rosmarinic Acid CPR medium pass
ROchi00G0006010.1 Rosmarinic Acid CPR medium pass
ROchi02G0051790.1 Rosmarinic Acid CPR low borderline
ROchi03G0025730.1 Rosmarinic Acid CPR medium pass
ROchi03G0026830.1 Rosmarinic Acid CPR low borderline
ROchi05G0027300.1 Rosmarinic Acid CPR medium pass
ROchi07G0045460.1 Rosmarinic Acid CPR low borderline
ROchi07G0046620.1 Rosmarinic Acid CPR medium pass
ROchi01G0026970.1 Rosmarinic Acid HPPR medium pass
ROchi01G0026990.1 Rosmarinic Acid HPPR medium pass
ROchi01G0027000.1 Rosmarinic Acid HPPR medium pass
ROchi01G0027010.1 Rosmarinic Acid HPPR medium pass
ROchi01G0027030.1 Rosmarinic Acid HPPR medium pass
ROchi01G0027040.1 Rosmarinic Acid HPPR medium pass
ROchi01G0027060.1 Rosmarinic Acid HPPR medium pass
ROchi02G0042040.1 Rosmarinic Acid HPPR medium pass
ROchi02G0042070.1 Rosmarinic Acid HPPR medium pass
ROchi02G0042090.1 Rosmarinic Acid HPPR medium pass
ROchi02G0042100.1 Rosmarinic Acid HPPR medium pass
ROchi05G0038970.1 Rosmarinic Acid HPPR medium pass
ROchi06G0041150.1 Rosmarinic Acid HPPR medium pass
ROchi01G0036370.1 Rosmarinic Acid PAL high pass
ROchi03G0018360.1 Rosmarinic Acid PAL high pass
ROchi07G0028760.1 Rosmarinic Acid PAL high pass
ROchi00G0018900.1 Rosmarinic Acid RAS low borderline
ROchi00G0018920.1 Rosmarinic Acid RAS low borderline
ROchi00G0019240.1 Rosmarinic Acid RAS low borderline
ROchi00G0019270.1 Rosmarinic Acid RAS medium pass
ROchi01G0022010.1 Rosmarinic Acid RAS low borderline
ROchi01G0042600.1 Rosmarinic Acid RAS low borderline
ROchi02G0004720.1 Rosmarinic Acid RAS medium pass