PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ROchi00G0019470.1 Terpenoid DXR low borderline
ROchi07G0014480.1 Terpenoid DXR medium pass
ROchi07G0014490.1 Terpenoid DXR medium pass
ROchi00G0009280.1 Terpenoid DXS medium pass
ROchi00G0009290.1 Terpenoid DXS medium pass
ROchi00G0009310.1 Terpenoid DXS medium pass
ROchi02G0021890.1 Terpenoid DXS medium pass
ROchi02G0021900.1 Terpenoid DXS medium pass
ROchi04G0023420.1 Terpenoid DXS medium pass
ROchi05G0046210.1 Terpenoid DXS low borderline
ROchi06G0039490.1 Terpenoid DXS medium pass
ROchi02G0011110.1 Terpenoid FPPS medium pass
ROchi05G0000290.1 Terpenoid FPPS medium pass
ROchi05G0053810.1 Terpenoid FPPS medium pass
ROchi05G0058570.1 Terpenoid FPPS medium pass
ROchi06G0026240.1 Terpenoid FPPS medium borderline
ROchi06G0033650.1 Terpenoid FPPS medium pass
ROchi00G0010340.1 Terpenoid GGPPS medium borderline
ROchi00G0012620.1 Terpenoid GGPPS medium borderline
ROchi01G0029000.1 Terpenoid GGPPS medium borderline
ROchi02G0015380.1 Terpenoid GGPPS medium borderline
ROchi02G0027590.1 Terpenoid GGPPS medium borderline
ROchi02G0029540.1 Terpenoid GGPPS medium borderline
ROchi02G0059930.1 Terpenoid GGPPS medium borderline
ROchi03G0004230.1 Terpenoid GGPPS medium borderline
ROchi03G0018820.1 Terpenoid GGPPS medium borderline
ROchi03G0026750.1 Terpenoid GGPPS medium borderline
ROchi05G0011320.1 Terpenoid GGPPS medium borderline
ROchi05G0012650.1 Terpenoid GGPPS medium borderline
ROchi05G0023400.1 Terpenoid GGPPS medium borderline
ROchi05G0033530.1 Terpenoid GGPPS medium borderline
ROchi05G0053790.1 Terpenoid GGPPS medium borderline
ROchi07G0040040.1 Terpenoid GGPPS medium borderline
ROchi05G0012560.1 Terpenoid GPPS medium borderline
ROchi05G0012640.1 Terpenoid GPPS medium pass
ROchi00G0018050.1 Terpenoid HDR/IspH low borderline
ROchi06G0014120.1 Terpenoid HDR/IspH high pass
ROchi06G0014130.1 Terpenoid HDR/IspH high pass
ROchi00G0013450.1 Terpenoid HDS/IspG low borderline
ROchi05G0046350.1 Terpenoid HDS/IspG high pass
ROchi02G0010570.1 Terpenoid HMGR medium pass
ROchi06G0027570.1 Terpenoid HMGR low borderline
ROchi06G0027770.1 Terpenoid HMGR medium pass
ROchi06G0027790.1 Terpenoid HMGR medium pass
ROchi06G0027810.1 Terpenoid HMGR medium pass
ROchi06G0027880.1 Terpenoid HMGR medium pass
ROchi06G0027890.1 Terpenoid HMGR medium pass
ROchi06G0027900.1 Terpenoid HMGR medium pass
ROchi06G0027950.1 Terpenoid HMGR medium pass
ROchi07G0032130.1 Terpenoid HMGR medium pass