PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ROchi07G0019300.1 Terpenoid HMGS high pass
ROchi03G0037070.1 Terpenoid IDI medium pass
ROchi05G0017300.1 Terpenoid MCT/IspD low borderline
ROchi07G0021800.1 Terpenoid MCT/IspD low borderline
ROchi07G0033810.1 Terpenoid MCT/IspD high pass
ROchi07G0016940.1 Terpenoid MDS/IspF high pass
ROchi01G0013470.1 Terpenoid MVD medium pass
ROchi02G0036010.1 Terpenoid MVD low borderline
ROchi02G0049940.1 Terpenoid MVD low borderline
ROchi01G0033980.1 Terpenoid MVK low borderline
ROchi03G0031910.1 Terpenoid MVK medium pass
ROchi03G0031930.1 Terpenoid MVK medium pass
ROchi03G0031960.1 Terpenoid MVK medium pass
ROchi06G0027510.1 Terpenoid MVK low borderline
ROchi07G0035340.1 Terpenoid MVK medium pass
ROchi07G0035350.1 Terpenoid MVK medium pass
ROchi07G0035360.1 Terpenoid MVK medium pass
ROchi07G0035370.1 Terpenoid MVK medium pass
ROchi07G0028830.1 Terpenoid PMK medium pass
ROchi00G0010140.1 Terpenoid TPS medium pass
ROchi00G0010150.1 Terpenoid TPS medium pass
ROchi00G0010160.1 Terpenoid TPS medium pass
ROchi00G0010320.1 Terpenoid TPS medium pass
ROchi00G0011840.1 Terpenoid TPS medium pass
ROchi01G0000680.1 Terpenoid TPS medium pass
ROchi01G0009050.1 Terpenoid TPS medium pass
ROchi01G0009070.1 Terpenoid TPS medium pass
ROchi01G0009090.1 Terpenoid TPS medium pass
ROchi01G0009100.1 Terpenoid TPS medium pass
ROchi01G0009220.1 Terpenoid TPS medium pass
ROchi01G0009260.1 Terpenoid TPS medium pass
ROchi01G0009270.1 Terpenoid TPS medium pass
ROchi01G0009290.1 Terpenoid TPS medium pass
ROchi01G0009320.1 Terpenoid TPS medium pass
ROchi01G0012720.1 Terpenoid TPS medium pass
ROchi01G0012730.1 Terpenoid TPS medium pass
ROchi01G0017760.1 Terpenoid TPS medium pass
ROchi02G0028900.1 Terpenoid TPS medium pass
ROchi02G0049840.1 Terpenoid TPS medium pass
ROchi02G0049850.1 Terpenoid TPS medium pass
ROchi02G0049870.1 Terpenoid TPS medium pass
ROchi02G0049890.1 Terpenoid TPS medium pass
ROchi02G0049950.1 Terpenoid TPS medium pass
ROchi02G0049960.1 Terpenoid TPS medium pass
ROchi02G0051340.1 Terpenoid TPS low borderline
ROchi03G0002580.1 Terpenoid TPS medium pass
ROchi03G0008200.1 Terpenoid TPS medium pass
ROchi03G0016240.1 Terpenoid TPS medium pass
ROchi03G0016260.1 Terpenoid TPS medium pass
ROchi03G0016310.1 Terpenoid TPS medium pass