PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff3672850412780 Alkaloid SGD low borderline
Roff3816920434910 Alkaloid SGD medium pass
Roff3861440446580 Alkaloid SGD medium pass
Roff10160008020 Alkaloid SLS medium borderline
Roff10290032330 Alkaloid SLS medium borderline
Roff10290032340 Alkaloid SLS medium borderline
Roff10290032350 Alkaloid SLS medium borderline
Roff10290032360 Alkaloid SLS medium borderline
Roff10290032540 Alkaloid SLS medium borderline
Roff10290032560 Alkaloid SLS medium borderline
Roff10290032580 Alkaloid SLS medium borderline
Roff10420055490 Alkaloid SLS medium borderline
Roff10440060430 Alkaloid SLS medium borderline
Roff10860083170 Alkaloid SLS medium borderline
Roff10860083190 Alkaloid SLS medium borderline
Roff10860083200 Alkaloid SLS medium borderline
Roff10860083220 Alkaloid SLS medium borderline
Roff11050087880 Alkaloid SLS medium borderline
Roff11520102390 Alkaloid SLS medium borderline
Roff11530107130 Alkaloid SLS medium borderline
Roff11530107140 Alkaloid SLS medium borderline
Roff11530107160 Alkaloid SLS medium borderline
Roff12680146170 Alkaloid SLS medium borderline
Roff12840156080 Alkaloid SLS medium borderline
Roff13310164090 Alkaloid SLS medium pass
Roff13310164100 Alkaloid SLS medium borderline
Roff14370184530 Alkaloid SLS low borderline
Roff20570263970 Alkaloid SLS medium borderline
Roff21810294760 Alkaloid SLS medium borderline
Roff22530301870 Alkaloid SLS medium borderline
Roff25190335690 Alkaloid SLS medium borderline
Roff2897600370590 Alkaloid SLS medium borderline
Roff3738110420660 Alkaloid SLS medium borderline
Roff3768710426060 Alkaloid SLS medium borderline
Roff3768710426070 Alkaloid SLS medium borderline
Roff8110495310 Alkaloid SLS medium borderline
Roff10170012640 Alkaloid STR low borderline
Roff10170012650 Alkaloid STR low borderline
Roff10170012660 Alkaloid STR low borderline
Roff10170013190 Alkaloid STR low borderline
Roff10170014540 Alkaloid STR low borderline
Roff10210019620 Alkaloid STR low borderline
Roff10240023440 Alkaloid STR low borderline
Roff10240023450 Alkaloid STR low borderline
Roff10240023460 Alkaloid STR low borderline
Roff10260027280 Alkaloid STR low borderline
Roff10270028960 Alkaloid STR medium pass
Roff10300034800 Alkaloid STR low borderline
Roff10420053600 Alkaloid STR low borderline
Roff10490065320 Alkaloid STR low borderline