PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff8300512900 Flavonoid ANR medium borderline
Roff11300094340 Flavonoid ANS/LDOX medium borderline
Roff13310163490 Flavonoid ANS/LDOX medium borderline
Roff13310163500 Flavonoid ANS/LDOX medium borderline
Roff13310163510 Flavonoid ANS/LDOX medium borderline
Roff14320179240 Flavonoid ANS/LDOX medium borderline
Roff14370182000 Flavonoid ANS/LDOX medium borderline
Roff17530224890 Flavonoid ANS/LDOX medium borderline
Roff18120232110 Flavonoid ANS/LDOX medium borderline
Roff19020247040 Flavonoid ANS/LDOX low borderline
Roff20600266240 Flavonoid ANS/LDOX medium borderline
Roff21250276410 Flavonoid ANS/LDOX low borderline
Roff21810293720 Flavonoid ANS/LDOX medium borderline
Roff25260338890 Flavonoid ANS/LDOX medium borderline
Roff3294360384240 Flavonoid ANS/LDOX medium borderline
Roff3770210426310 Flavonoid ANS/LDOX medium pass
Roff10290032420 Flavonoid C4H medium borderline
Roff10290032430 Flavonoid C4H medium borderline
Roff10300043960 Flavonoid C4H medium borderline
Roff10490062380 Flavonoid C4H medium borderline
Roff10490062390 Flavonoid C4H medium borderline
Roff10590077710 Flavonoid C4H low borderline
Roff10860083190 Flavonoid C4H medium borderline
Roff10860083200 Flavonoid C4H medium borderline
Roff12680146180 Flavonoid C4H low borderline
Roff15910211520 Flavonoid C4H low borderline
Roff18940245670 Flavonoid C4H medium pass
Roff19530252380 Flavonoid C4H medium borderline
Roff27430361500 Flavonoid C4H medium borderline
Roff2953410375150 Flavonoid C4H medium borderline
Roff3897970462070 Flavonoid C4H low borderline
Roff3921180472560 Flavonoid C4H medium borderline
Roff10590077910 Flavonoid CHI medium pass
Roff10590077920 Flavonoid CHI medium pass
Roff21750290790 Flavonoid CHI medium pass
Roff10250025930 Flavonoid CHS medium pass
Roff10690082190 Flavonoid CHS medium pass
Roff11010086330 Flavonoid CHS medium pass
Roff12600141150 Flavonoid CHS low borderline
Roff17220221300 Flavonoid CHS medium pass
Roff22380299760 Flavonoid CHS low borderline
Roff22380299770 Flavonoid CHS low borderline
Roff22380299780 Flavonoid CHS low borderline
Roff24130312960 Flavonoid CHS medium pass
Roff26840355750 Flavonoid CHS medium pass
Roff26910356740 Flavonoid CHS medium pass
Roff27760365170 Flavonoid CHS low borderline
Roff2983940375880 Flavonoid CHS medium pass
Roff3865040448080 Flavonoid CHS medium pass
Roff10420051380 Flavonoid DFR medium pass