PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff11530107130 Flavonoid F3'H/CYP75B low borderline
Roff11530107140 Flavonoid F3'H/CYP75B medium borderline
Roff11530107150 Flavonoid F3'H/CYP75B low borderline
Roff11530107160 Flavonoid F3'H/CYP75B low borderline
Roff11530108450 Flavonoid F3'H/CYP75B high pass
Roff11530109560 Flavonoid F3'H/CYP75B medium borderline
Roff11790121000 Flavonoid F3'H/CYP75B medium borderline
Roff11790122140 Flavonoid F3'H/CYP75B medium borderline
Roff12370135130 Flavonoid F3'H/CYP75B medium borderline
Roff12430137760 Flavonoid F3'H/CYP75B medium borderline
Roff12430137790 Flavonoid F3'H/CYP75B medium borderline
Roff12550138820 Flavonoid F3'H/CYP75B medium borderline
Roff12600140970 Flavonoid F3'H/CYP75B low borderline
Roff12730150920 Flavonoid F3'H/CYP75B low borderline
Roff12730153190 Flavonoid F3'H/CYP75B low borderline
Roff13130159320 Flavonoid F3'H/CYP75B low borderline
Roff13310164590 Flavonoid F3'H/CYP75B medium borderline
Roff13940173730 Flavonoid F3'H/CYP75B medium borderline
Roff14370183220 Flavonoid F3'H/CYP75B medium borderline
Roff14370184520 Flavonoid F3'H/CYP75B low borderline
Roff14510188640 Flavonoid F3'H/CYP75B medium borderline
Roff15360199190 Flavonoid F3'H/CYP75B medium borderline
Roff15410203610 Flavonoid F3'H/CYP75B medium borderline
Roff15910211460 Flavonoid F3'H/CYP75B medium borderline
Roff16680218220 Flavonoid F3'H/CYP75B low borderline
Roff17200220000 Flavonoid F3'H/CYP75B medium borderline
Roff17700226820 Flavonoid F3'H/CYP75B medium borderline
Roff19530253710 Flavonoid F3'H/CYP75B medium borderline
Roff20040257770 Flavonoid F3'H/CYP75B low borderline
Roff2030050260000 Flavonoid F3'H/CYP75B low borderline
Roff21350279990 Flavonoid F3'H/CYP75B medium borderline
Roff21350280000 Flavonoid F3'H/CYP75B medium borderline
Roff21350280010 Flavonoid F3'H/CYP75B medium borderline
Roff21540286710 Flavonoid F3'H/CYP75B medium borderline
Roff21540286720 Flavonoid F3'H/CYP75B medium borderline
Roff21760291140 Flavonoid F3'H/CYP75B medium borderline
Roff21810292180 Flavonoid F3'H/CYP75B medium borderline
Roff2223960298160 Flavonoid F3'H/CYP75B medium borderline
Roff2224290298550 Flavonoid F3'H/CYP75B medium borderline
Roff22530301870 Flavonoid F3'H/CYP75B low borderline
Roff24030308570 Flavonoid F3'H/CYP75B medium borderline
Roff24080309210 Flavonoid F3'H/CYP75B low borderline
Roff24170314790 Flavonoid F3'H/CYP75B medium borderline
Roff24170314810 Flavonoid F3'H/CYP75B medium borderline
Roff24470324250 Flavonoid F3'H/CYP75B medium borderline
Roff24470324260 Flavonoid F3'H/CYP75B medium borderline
Roff24470324310 Flavonoid F3'H/CYP75B low borderline
Roff24470324370 Flavonoid F3'H/CYP75B medium borderline
Roff24530326030 Flavonoid F3'H/CYP75B medium borderline
Roff25260339990 Flavonoid F3'H/CYP75B medium borderline