PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff3864640448010 Flavonoid IFS low borderline
Roff3870510450480 Flavonoid IFS low borderline
Roff3879270452990 Flavonoid IFS medium borderline
Roff3879570453250 Flavonoid IFS medium borderline
Roff3880740453450 Flavonoid IFS medium borderline
Roff3885920455120 Flavonoid IFS low borderline
Roff3891400457770 Flavonoid IFS medium borderline
Roff3891950458550 Flavonoid IFS low borderline
Roff3900160462940 Flavonoid IFS medium borderline
Roff3900160462960 Flavonoid IFS medium borderline
Roff3900160462970 Flavonoid IFS medium borderline
Roff3900160462990 Flavonoid IFS medium borderline
Roff3931510477100 Flavonoid IFS low borderline
Roff3931510477110 Flavonoid IFS low borderline
Roff3934860477900 Flavonoid IFS medium borderline
Roff3936650478590 Flavonoid IFS low borderline
Roff3941090480850 Flavonoid IFS low borderline
Roff5851610492350 Flavonoid IFS medium borderline
Roff5851620492390 Flavonoid IFS medium borderline
Roff5851620492400 Flavonoid IFS medium borderline
Roff5871460492890 Flavonoid IFS medium borderline
Roff5871470492910 Flavonoid IFS medium borderline
Roff5871510492950 Flavonoid IFS low borderline
Roff5871670492970 Flavonoid IFS low borderline
Roff8110495070 Flavonoid IFS medium borderline
Roff8110495380 Flavonoid IFS medium borderline
Roff8110495390 Flavonoid IFS medium borderline
Roff8110495550 Flavonoid IFS medium borderline
Roff8110498870 Flavonoid IFS medium borderline
Roff8300509670 Flavonoid IFS low borderline
Roff11520100730 Flavonoid PAL high pass
Roff12670144380 Flavonoid PAL low borderline
Roff16590215870 Flavonoid PAL high pass
Roff19530253080 Flavonoid PAL high pass
Roff27270358660 Flavonoid PAL high pass
Roff10160007970 Flavonoid UFGT low borderline
Roff10160009050 Flavonoid UFGT medium pass
Roff10170013780 Flavonoid UFGT high pass
Roff10200017310 Flavonoid UFGT medium pass
Roff10200017320 Flavonoid UFGT medium pass
Roff10200018180 Flavonoid UFGT medium pass
Roff10230022430 Flavonoid UFGT medium pass
Roff10230022440 Flavonoid UFGT medium pass
Roff10260027260 Flavonoid UFGT high pass
Roff10270028400 Flavonoid UFGT high pass
Roff10270028410 Flavonoid UFGT high pass
Roff10300044870 Flavonoid UFGT high pass
Roff10420053530 Flavonoid UFGT high pass
Roff10440059120 Flavonoid UFGT medium pass
Roff10440059640 Flavonoid UFGT low borderline