PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff24960328390 Phenylpropanoid CCR medium borderline
Roff25930345180 Phenylpropanoid CCR low borderline
Roff27430362940 Phenylpropanoid CCR medium borderline
Roff3305990385390 Phenylpropanoid CCR low borderline
Roff3708040416610 Phenylpropanoid CCR medium borderline
Roff3746250422350 Phenylpropanoid CCR medium pass
Roff3767170425670 Phenylpropanoid CCR medium borderline
Roff3829970437570 Phenylpropanoid CCR medium borderline
Roff3906270466100 Phenylpropanoid CCR medium borderline
Roff3906270466110 Phenylpropanoid CCR medium borderline
Roff3927920475760 Phenylpropanoid CCR medium pass
Roff8300512900 Phenylpropanoid CCR medium borderline
Roff8300512910 Phenylpropanoid CCR low borderline
Roff10160004430 Phenylpropanoid CCoAOMT medium pass
Roff10160004440 Phenylpropanoid CCoAOMT medium pass
Roff10160004490 Phenylpropanoid CCoAOMT medium pass
Roff10170013520 Phenylpropanoid CCoAOMT medium pass
Roff10170013530 Phenylpropanoid CCoAOMT medium pass
Roff10170013540 Phenylpropanoid CCoAOMT medium pass
Roff10170013550 Phenylpropanoid CCoAOMT medium pass
Roff10170013570 Phenylpropanoid CCoAOMT medium pass
Roff11530110620 Phenylpropanoid CCoAOMT medium pass
Roff12370135160 Phenylpropanoid CCoAOMT medium pass
Roff12370135170 Phenylpropanoid CCoAOMT medium pass
Roff3591660405490 Phenylpropanoid CCoAOMT medium pass
Roff3591660405500 Phenylpropanoid CCoAOMT medium pass
Roff3695230414600 Phenylpropanoid CCoAOMT medium pass
Roff8300509880 Phenylpropanoid CCoAOMT medium pass
Roff10210019450 Phenylpropanoid COMT medium pass
Roff10210019460 Phenylpropanoid COMT medium pass
Roff10210019470 Phenylpropanoid COMT medium pass
Roff10210019480 Phenylpropanoid COMT low borderline
Roff10210019490 Phenylpropanoid COMT medium pass
Roff10210019500 Phenylpropanoid COMT medium pass
Roff10250025620 Phenylpropanoid COMT medium pass
Roff10250025640 Phenylpropanoid COMT medium pass
Roff10250025650 Phenylpropanoid COMT medium pass
Roff11530110070 Phenylpropanoid COMT medium pass
Roff11640118420 Phenylpropanoid COMT low borderline
Roff12730151280 Phenylpropanoid COMT low borderline
Roff12730152750 Phenylpropanoid COMT medium pass
Roff13310164600 Phenylpropanoid COMT low borderline
Roff14650190540 Phenylpropanoid COMT medium pass
Roff14650190550 Phenylpropanoid COMT medium pass
Roff14650190560 Phenylpropanoid COMT medium pass
Roff21790291380 Phenylpropanoid COMT low borderline
Roff2831610367650 Phenylpropanoid COMT low borderline
Roff3448020392940 Phenylpropanoid COMT medium pass
Roff3881410453560 Phenylpropanoid COMT medium pass
Roff5760530488680 Phenylpropanoid COMT medium pass