PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff27430363140 Rosmarinic Acid TAT medium pass
Roff27430363150 Rosmarinic Acid TAT medium pass
Roff27430363160 Rosmarinic Acid TAT medium pass
Roff3153900379240 Rosmarinic Acid TAT medium pass
Roff3302040384660 Rosmarinic Acid TAT low borderline
Roff3356550389720 Rosmarinic Acid TAT low borderline
Roff3504520398830 Rosmarinic Acid TAT low borderline
Roff3561250402630 Rosmarinic Acid TAT medium pass
Roff3561250402640 Rosmarinic Acid TAT low borderline
Roff3610050406900 Rosmarinic Acid TAT medium pass
Roff3610050406910 Rosmarinic Acid TAT medium pass
Roff3622010407550 Rosmarinic Acid TAT low borderline
Roff3639080409010 Rosmarinic Acid TAT low borderline
Roff3668910411970 Rosmarinic Acid TAT medium pass
Roff3708450416700 Rosmarinic Acid TAT low borderline
Roff3833930438840 Rosmarinic Acid TAT low borderline
Roff3858070445570 Rosmarinic Acid TAT low borderline
Roff3867240448670 Rosmarinic Acid TAT medium pass
Roff3906900466550 Rosmarinic Acid TAT low borderline
Roff3916490470480 Rosmarinic Acid TAT low borderline
Roff3931560477130 Rosmarinic Acid TAT medium pass
Roff3934860478000 Rosmarinic Acid TAT medium pass
Roff4502680483970 Rosmarinic Acid TAT medium pass
Roff4502680483980 Rosmarinic Acid TAT medium pass
Roff4916750485310 Rosmarinic Acid TAT medium pass
Roff5768770489310 Rosmarinic Acid TAT medium pass
Roff5768780489320 Rosmarinic Acid TAT medium pass
Roff10160006380 Steroid BR6OX1/CYP85A1 medium borderline
Roff10160008020 Steroid BR6OX1/CYP85A1 medium borderline
Roff10170014460 Steroid BR6OX1/CYP85A1 medium borderline
Roff10170014480 Steroid BR6OX1/CYP85A1 medium borderline
Roff10230020320 Steroid BR6OX1/CYP85A1 low borderline
Roff10230022960 Steroid BR6OX1/CYP85A1 medium borderline
Roff10780082950 Steroid BR6OX1/CYP85A1 medium borderline
Roff12670142010 Steroid BR6OX1/CYP85A1 low borderline
Roff14430186680 Steroid BR6OX1/CYP85A1 medium borderline
Roff15360199200 Steroid BR6OX1/CYP85A1 medium borderline
Roff15490204730 Steroid BR6OX1/CYP85A1 medium borderline
Roff18070229490 Steroid BR6OX1/CYP85A1 medium borderline
Roff18070229820 Steroid BR6OX1/CYP85A1 medium borderline
Roff19690255270 Steroid BR6OX1/CYP85A1 medium borderline
Roff19690255280 Steroid BR6OX1/CYP85A1 medium borderline
Roff19690255290 Steroid BR6OX1/CYP85A1 medium borderline
Roff20850269630 Steroid BR6OX1/CYP85A1 medium borderline
Roff21810292180 Steroid BR6OX1/CYP85A1 medium borderline
Roff24170314810 Steroid BR6OX1/CYP85A1 medium borderline
Roff28570368970 Steroid BR6OX1/CYP85A1 medium borderline
Roff3265680383210 Steroid BR6OX1/CYP85A1 medium borderline
Roff3338840388330 Steroid BR6OX1/CYP85A1 medium borderline
Roff3880740453450 Steroid BR6OX1/CYP85A1 medium borderline