PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff2708210357750 Steroid CYP90D1 medium borderline
Roff27430362460 Steroid CYP90D1 medium borderline
Roff2894150370150 Steroid CYP90D1 medium borderline
Roff3155650379600 Steroid CYP90D1 low borderline
Roff3417090391760 Steroid CYP90D1 low borderline
Roff3555760402200 Steroid CYP90D1 low borderline
Roff3577990404420 Steroid CYP90D1 low borderline
Roff3723010418270 Steroid CYP90D1 medium borderline
Roff3759400424470 Steroid CYP90D1 low borderline
Roff3780590428380 Steroid CYP90D1 low borderline
Roff3835820439220 Steroid CYP90D1 medium borderline
Roff3835820439230 Steroid CYP90D1 medium borderline
Roff3841980440550 Steroid CYP90D1 low borderline
Roff3897970462070 Steroid CYP90D1 medium borderline
Roff3921180472560 Steroid CYP90D1 low borderline
Roff3941090480850 Steroid CYP90D1 medium borderline
Roff5661200487350 Steroid CYP90D1 low borderline
Roff5661210487380 Steroid CYP90D1 low borderline
Roff10230023140 Steroid DET2 low borderline
Roff10230023150 Steroid DET2 low borderline
Roff21720290430 Steroid DET2 medium pass
Roff3672620412650 Steroid DET2 low borderline
Roff3672620412660 Steroid DET2 low borderline
Roff3839220439980 Steroid DET2 low borderline
Roff3839220440000 Steroid DET2 medium pass
Roff10300036020 Steroid DWF1 medium pass
Roff8210507600 Steroid DWF1 medium pass
Roff8210507610 Steroid DWF1 medium pass
Roff8210507620 Steroid DWF1 medium pass
Roff10170012910 Steroid DWF4/CYP90B1 low borderline
Roff10170013420 Steroid DWF4/CYP90B1 low borderline
Roff10170014470 Steroid DWF4/CYP90B1 medium borderline
Roff10230022970 Steroid DWF4/CYP90B1 medium borderline
Roff10230022980 Steroid DWF4/CYP90B1 medium borderline
Roff10230022990 Steroid DWF4/CYP90B1 medium borderline
Roff10230023000 Steroid DWF4/CYP90B1 medium borderline
Roff10290032340 Steroid DWF4/CYP90B1 low borderline
Roff10290032350 Steroid DWF4/CYP90B1 low borderline
Roff10290032370 Steroid DWF4/CYP90B1 low borderline
Roff10290032390 Steroid DWF4/CYP90B1 low borderline
Roff10290032400 Steroid DWF4/CYP90B1 low borderline
Roff10290032410 Steroid DWF4/CYP90B1 low borderline
Roff10290032420 Steroid DWF4/CYP90B1 low borderline
Roff10290032430 Steroid DWF4/CYP90B1 low borderline
Roff10290032540 Steroid DWF4/CYP90B1 low borderline
Roff10300034790 Steroid DWF4/CYP90B1 low borderline
Roff10420052890 Steroid DWF4/CYP90B1 low borderline
Roff10420055490 Steroid DWF4/CYP90B1 low borderline
Roff10440060430 Steroid DWF4/CYP90B1 low borderline
Roff10490062390 Steroid DWF4/CYP90B1 low borderline