PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff11530109590 Steroid SQS/FDFT1 high pass
Roff13680171670 Steroid SQS/FDFT1 medium pass
Roff13680171680 Steroid SQS/FDFT1 medium pass
Roff21440284000 Steroid SQS/FDFT1 high pass
Roff24130313120 Steroid SQS/FDFT1 high pass
Roff24190317600 Steroid SQS/FDFT1 high pass
Roff24190317610 Steroid SQS/FDFT1 high pass
Roff2680090354470 Steroid SQS/FDFT1 medium pass
Roff3901420463540 Steroid SQS/FDFT1 low borderline
Roff3901420463550 Steroid SQS/FDFT1 low borderline
Roff3901420463570 Steroid SQS/FDFT1 low borderline
Roff10250025890 Terpenoid AACT medium borderline
Roff10690082210 Terpenoid AACT medium borderline
Roff10690082220 Terpenoid AACT medium borderline
Roff11050088310 Terpenoid AACT medium borderline
Roff18450237570 Terpenoid AACT low borderline
Roff18450237580 Terpenoid AACT low borderline
Roff26060347770 Terpenoid AACT medium borderline
Roff3293220384040 Terpenoid AACT medium borderline
Roff3632450408240 Terpenoid AACT medium borderline
Roff3632450408250 Terpenoid AACT medium borderline
Roff5814940491140 Terpenoid AACT medium borderline
Roff5815400491160 Terpenoid AACT medium borderline
Roff10160005090 Terpenoid BAHD low borderline
Roff10160005820 Terpenoid BAHD medium pass
Roff10160005830 Terpenoid BAHD medium pass
Roff10170012750 Terpenoid BAHD low borderline
Roff10200017240 Terpenoid BAHD medium pass
Roff10200017250 Terpenoid BAHD medium pass
Roff10200017260 Terpenoid BAHD medium pass
Roff10200017270 Terpenoid BAHD medium pass
Roff10200018310 Terpenoid BAHD low borderline
Roff10210019910 Terpenoid BAHD medium pass
Roff10210019920 Terpenoid BAHD medium pass
Roff10210019930 Terpenoid BAHD medium pass
Roff10210019940 Terpenoid BAHD medium pass
Roff10230020490 Terpenoid BAHD medium pass
Roff10240024120 Terpenoid BAHD medium pass
Roff10240025400 Terpenoid BAHD medium pass
Roff10260026880 Terpenoid BAHD medium pass
Roff10260026890 Terpenoid BAHD medium pass
Roff10270028250 Terpenoid BAHD medium pass
Roff10290033140 Terpenoid BAHD low borderline
Roff10300033710 Terpenoid BAHD medium pass
Roff10300039450 Terpenoid BAHD low borderline
Roff10300041560 Terpenoid BAHD medium pass
Roff10300041570 Terpenoid BAHD medium pass
Roff10330046870 Terpenoid BAHD medium pass
Roff10330048310 Terpenoid BAHD medium pass
Roff10340048440 Terpenoid BAHD medium pass