PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Srurcontig_4990245800 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5040247790 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5240258390 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5240258440 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5240258460 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5350264050 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5350264420 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5500277490 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5670291090 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5710293950 Steroid DWF4/CYP90B1 low borderline
Srurcontig_5710293980 Steroid DWF4/CYP90B1 low borderline
Srurcontig_600303200 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_600303230 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_6290318590 Steroid DWF4/CYP90B1 low borderline
Srurcontig_6290319630 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_6580338050 Steroid DWF4/CYP90B1 low borderline
Srurcontig_6610340230 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_7020351570 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7260359320 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590386770 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590387170 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590387190 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7590387200 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7830398780 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7830398830 Steroid DWF4/CYP90B1 low borderline
Srurcontig_7850399230 Steroid DWF4/CYP90B1 low borderline
Srurcontig_790403130 Steroid DWF4/CYP90B1 low borderline
Srurcontig_8380427520 Steroid DWF4/CYP90B1 low borderline
Srurcontig_8380427540 Steroid DWF4/CYP90B1 low borderline
Srurcontig_8900455160 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9160472010 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9250475170 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9260475340 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9540484520 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_9540484530 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_9540484540 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_9870499420 Steroid DWF4/CYP90B1 low borderline
Srurcontig_9980504260 Steroid DWF4/CYP90B1 low borderline