PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
Srurcontig_3060146040 Phenylpropanoid PAL high pass
Srurcontig_3060146050 Phenylpropanoid PAL high pass
Srurcontig_3060146130 Phenylpropanoid PAL high pass
Srurcontig_3350162420 Phenylpropanoid PAL high pass
Srurcontig_3780184190 Phenylpropanoid PAL high pass
Srurcontig_5080248690 Phenylpropanoid PAL high pass
Srurcontig_5080248710 Phenylpropanoid PAL medium pass
Srurcontig_5080248720 Phenylpropanoid PAL high pass
Srurcontig_5080248780 Phenylpropanoid PAL high pass
Srurcontig_5410271260 Phenylpropanoid PAL high pass
Srurcontig_5410271280 Phenylpropanoid PAL high pass
Srurcontig_5520278320 Phenylpropanoid PAL medium pass
Srurcontig_5520278330 Phenylpropanoid PAL medium pass
Srurcontig_5670291270 Phenylpropanoid PAL low borderline
Srurcontig_6070306250 Phenylpropanoid PAL medium pass
Srurcontig_6070306260 Phenylpropanoid PAL medium pass
Srurcontig_6580337220 Phenylpropanoid PAL high pass
Srurcontig_6580337280 Phenylpropanoid PAL high pass
Srurcontig_70350890 Phenylpropanoid PAL medium pass
Srurcontig_7570379040 Phenylpropanoid PAL low borderline
Srurcontig_8140419340 Phenylpropanoid PAL high pass
Srurcontig_850435620 Phenylpropanoid PAL medium pass
Srurcontig_9150471080 Phenylpropanoid PAL high pass
Srurcontig_9360479910 Phenylpropanoid PAL high pass
Srurcontig_10150009590 Rosmarinic Acid PAL high pass
Srurcontig_10150009680 Rosmarinic Acid PAL high pass
Srurcontig_10390018490 Rosmarinic Acid PAL high pass
Srurcontig_10390018530 Rosmarinic Acid PAL high pass
Srurcontig_10390018590 Rosmarinic Acid PAL high pass
Srurcontig_10390018660 Rosmarinic Acid PAL high pass
Srurcontig_10920041600 Rosmarinic Acid PAL high pass
Srurcontig_11180059000 Rosmarinic Acid PAL low borderline
Srurcontig_11180059070 Rosmarinic Acid PAL medium pass
Srurcontig_2030101220 Rosmarinic Acid PAL high pass
Srurcontig_3040143500 Rosmarinic Acid PAL high pass
Srurcontig_3040143520 Rosmarinic Acid PAL high pass
Srurcontig_3060145730 Rosmarinic Acid PAL high pass
Srurcontig_3060146040 Rosmarinic Acid PAL high pass
Srurcontig_3060146050 Rosmarinic Acid PAL high pass
Srurcontig_3060146130 Rosmarinic Acid PAL high pass
Srurcontig_3350162420 Rosmarinic Acid PAL high pass
Srurcontig_3780184190 Rosmarinic Acid PAL high pass
Srurcontig_5080248690 Rosmarinic Acid PAL high pass
Srurcontig_5080248710 Rosmarinic Acid PAL medium pass
Srurcontig_5080248720 Rosmarinic Acid PAL high pass
Srurcontig_5080248780 Rosmarinic Acid PAL high pass
Srurcontig_5410271260 Rosmarinic Acid PAL high pass
Srurcontig_5410271280 Rosmarinic Acid PAL high pass
Srurcontig_5520278320 Rosmarinic Acid PAL medium pass
Srurcontig_5520278330 Rosmarinic Acid PAL medium pass