PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_10030002960 Alkaloid T3O medium borderline
Srurcontig_10030002970 Alkaloid T3O medium borderline
Srurcontig_10320017110 Alkaloid T3O medium pass
Srurcontig_10320017140 Alkaloid T3O low borderline
Srurcontig_10490021860 Alkaloid T3O medium borderline
Srurcontig_10560023030 Alkaloid T3O medium borderline
Srurcontig_11180058180 Alkaloid T3O low borderline
Srurcontig_11180058330 Alkaloid T3O medium pass
Srurcontig_1990098580 Alkaloid T3O medium pass
Srurcontig_2210110680 Alkaloid T3O medium borderline
Srurcontig_2310114580 Alkaloid T3O low borderline
Srurcontig_2430120430 Alkaloid T3O medium pass
Srurcontig_2430121050 Alkaloid T3O medium borderline
Srurcontig_2550124280 Alkaloid T3O medium borderline
Srurcontig_2560125750 Alkaloid T3O medium pass
Srurcontig_2680129010 Alkaloid T3O medium borderline
Srurcontig_2900137200 Alkaloid T3O medium pass
Srurcontig_2930138800 Alkaloid T3O low borderline
Srurcontig_3060145120 Alkaloid T3O low borderline
Srurcontig_3070146920 Alkaloid T3O medium pass
Srurcontig_3150151090 Alkaloid T3O medium borderline
Srurcontig_3150151120 Alkaloid T3O medium borderline
Srurcontig_3170151720 Alkaloid T3O medium borderline
Srurcontig_3490169890 Alkaloid T3O medium borderline
Srurcontig_3490170940 Alkaloid T3O medium borderline
Srurcontig_3630177970 Alkaloid T3O medium borderline
Srurcontig_370179740 Alkaloid T3O medium pass
Srurcontig_370179750 Alkaloid T3O medium pass
Srurcontig_370179760 Alkaloid T3O medium pass
Srurcontig_370179770 Alkaloid T3O medium pass
Srurcontig_390189600 Alkaloid T3O medium borderline
Srurcontig_3910196340 Alkaloid T3O medium borderline
Srurcontig_4430219010 Alkaloid T3O low borderline
Srurcontig_4430219180 Alkaloid T3O medium pass
Srurcontig_4580229780 Alkaloid T3O medium pass
Srurcontig_4680235520 Alkaloid T3O medium borderline
Srurcontig_4810239770 Alkaloid T3O medium borderline
Srurcontig_4810239780 Alkaloid T3O medium borderline
Srurcontig_4990245790 Alkaloid T3O medium borderline
Srurcontig_4990245800 Alkaloid T3O medium borderline
Srurcontig_510251620 Alkaloid T3O low borderline
Srurcontig_5350264050 Alkaloid T3O medium borderline
Srurcontig_5360266860 Alkaloid T3O medium borderline
Srurcontig_5520279270 Alkaloid T3O low borderline
Srurcontig_600303200 Alkaloid T3O medium pass
Srurcontig_600303230 Alkaloid T3O medium pass
Srurcontig_6290319630 Alkaloid T3O medium pass
Srurcontig_6580338050 Alkaloid T3O medium pass
Srurcontig_6610340200 Alkaloid T3O medium pass
Srurcontig_6800344780 Alkaloid T3O medium borderline