PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_10110008790 Flavonoid UFGT medium pass
Srurcontig_10220012970 Flavonoid UFGT medium pass
Srurcontig_10610024000 Flavonoid UFGT medium pass
Srurcontig_1080036850 Flavonoid UFGT medium pass
Srurcontig_1080037250 Flavonoid UFGT medium pass
Srurcontig_11050046640 Flavonoid UFGT medium pass
Srurcontig_11120051710 Flavonoid UFGT high pass
Srurcontig_11120051720 Flavonoid UFGT high pass
Srurcontig_1340070530 Flavonoid UFGT medium pass
Srurcontig_1420073050 Flavonoid UFGT medium pass
Srurcontig_1600079360 Flavonoid UFGT medium pass
Srurcontig_1780085140 Flavonoid UFGT medium pass
Srurcontig_1780085150 Flavonoid UFGT medium pass
Srurcontig_1830088430 Flavonoid UFGT medium pass
Srurcontig_2400117160 Flavonoid UFGT medium pass
Srurcontig_2470122240 Flavonoid UFGT medium pass
Srurcontig_2470122310 Flavonoid UFGT medium pass
Srurcontig_2810134420 Flavonoid UFGT low borderline
Srurcontig_3070146850 Flavonoid UFGT medium pass
Srurcontig_3070146980 Flavonoid UFGT medium pass
Srurcontig_3080147850 Flavonoid UFGT high pass
Srurcontig_3690179470 Flavonoid UFGT high pass
Srurcontig_3780184160 Flavonoid UFGT medium pass
Srurcontig_470235700 Flavonoid UFGT medium pass
Srurcontig_4750238500 Flavonoid UFGT high pass
Srurcontig_4920243850 Flavonoid UFGT medium pass
Srurcontig_4920243930 Flavonoid UFGT medium pass
Srurcontig_4920243940 Flavonoid UFGT medium pass
Srurcontig_5080248630 Flavonoid UFGT medium pass
Srurcontig_5500277680 Flavonoid UFGT high pass
Srurcontig_5500277690 Flavonoid UFGT high pass
Srurcontig_5660289450 Flavonoid UFGT low borderline
Srurcontig_5660290640 Flavonoid UFGT medium pass
Srurcontig_5820297830 Flavonoid UFGT medium pass
Srurcontig_6160309910 Flavonoid UFGT medium pass
Srurcontig_630320910 Flavonoid UFGT medium pass
Srurcontig_6390327370 Flavonoid UFGT low borderline
Srurcontig_6610340170 Flavonoid UFGT medium pass
Srurcontig_7560375080 Flavonoid UFGT high pass
Srurcontig_7570380360 Flavonoid UFGT medium pass
Srurcontig_7580381610 Flavonoid UFGT low borderline
Srurcontig_7600389430 Flavonoid UFGT medium pass
Srurcontig_7600389440 Flavonoid UFGT medium pass
Srurcontig_7600389450 Flavonoid UFGT medium pass
Srurcontig_7600389480 Flavonoid UFGT high pass
Srurcontig_760388480 Flavonoid UFGT medium pass
Srurcontig_7850399310 Flavonoid UFGT medium pass
Srurcontig_7850400110 Flavonoid UFGT high pass
Srurcontig_7850400120 Flavonoid UFGT medium pass
Srurcontig_7850400250 Flavonoid UFGT medium pass