PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Srurcontig_11120051410 Terpenoid AACT medium borderline
Srurcontig_11170054170 Terpenoid AACT medium borderline
Srurcontig_2290113170 Terpenoid AACT low borderline
Srurcontig_2430119840 Terpenoid AACT low borderline
Srurcontig_2430119850 Terpenoid AACT low borderline
Srurcontig_2950140110 Terpenoid AACT medium borderline
Srurcontig_3420166750 Terpenoid AACT low borderline
Srurcontig_3890187530 Terpenoid AACT medium borderline
Srurcontig_4570228960 Terpenoid AACT medium pass
Srurcontig_5340263230 Terpenoid AACT medium pass
Srurcontig_7060352830 Terpenoid AACT medium borderline
Srurcontig_7600389290 Terpenoid AACT medium pass
Srurcontig_8480432010 Terpenoid AACT medium pass
Srurcontig_8480432020 Terpenoid AACT medium pass
Srurcontig_8820451670 Terpenoid AACT medium borderline
Srurcontig_10030002910 Terpenoid BAHD medium pass
Srurcontig_10040003550 Terpenoid BAHD low borderline
Srurcontig_10230013010 Terpenoid BAHD medium pass
Srurcontig_10420019460 Terpenoid BAHD medium pass
Srurcontig_10610024020 Terpenoid BAHD medium pass
Srurcontig_10730032840 Terpenoid BAHD medium pass
Srurcontig_1080037120 Terpenoid BAHD medium pass
Srurcontig_10820037750 Terpenoid BAHD low borderline
Srurcontig_10840037970 Terpenoid BAHD low borderline
Srurcontig_10910041040 Terpenoid BAHD medium pass
Srurcontig_10950042120 Terpenoid BAHD medium pass
Srurcontig_11120050280 Terpenoid BAHD medium pass
Srurcontig_11170054770 Terpenoid BAHD medium pass
Srurcontig_11180059890 Terpenoid BAHD medium pass
Srurcontig_1290067440 Terpenoid BAHD medium pass
Srurcontig_1340070720 Terpenoid BAHD medium pass
Srurcontig_1420074250 Terpenoid BAHD medium pass
Srurcontig_1500076950 Terpenoid BAHD medium pass
Srurcontig_1520077390 Terpenoid BAHD low borderline
Srurcontig_1700082800 Terpenoid BAHD low borderline
Srurcontig_170082480 Terpenoid BAHD medium pass
Srurcontig_1760084750 Terpenoid BAHD medium pass
Srurcontig_180085510 Terpenoid BAHD medium pass
Srurcontig_1830087810 Terpenoid BAHD medium pass
Srurcontig_1990098090 Terpenoid BAHD low borderline
Srurcontig_2100106900 Terpenoid BAHD low borderline
Srurcontig_210106310 Terpenoid BAHD medium pass
Srurcontig_210106810 Terpenoid BAHD medium pass
Srurcontig_2170108720 Terpenoid BAHD low borderline
Srurcontig_2200110310 Terpenoid BAHD medium pass
Srurcontig_2210110720 Terpenoid BAHD medium pass
Srurcontig_2300114090 Terpenoid BAHD low borderline
Srurcontig_2340115750 Terpenoid BAHD medium pass
Srurcontig_2370116300 Terpenoid BAHD medium pass
Srurcontig_2550124320 Terpenoid BAHD low borderline