PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Srurcontig_630320910 Alkaloid 7DLGT medium pass
Srurcontig_6610340170 Alkaloid 7DLGT low borderline
Srurcontig_7560375080 Alkaloid 7DLGT low borderline
Srurcontig_7570380360 Alkaloid 7DLGT low borderline
Srurcontig_7600389430 Alkaloid 7DLGT medium pass
Srurcontig_7600389440 Alkaloid 7DLGT medium pass
Srurcontig_7600389450 Alkaloid 7DLGT medium pass
Srurcontig_7600389480 Alkaloid 7DLGT medium pass
Srurcontig_760388480 Alkaloid 7DLGT medium pass
Srurcontig_7850399310 Alkaloid 7DLGT medium pass
Srurcontig_7850400110 Alkaloid 7DLGT medium pass
Srurcontig_7850400120 Alkaloid 7DLGT medium pass
Srurcontig_7850400250 Alkaloid 7DLGT medium pass
Srurcontig_8040411520 Alkaloid 7DLGT medium pass
Srurcontig_8040412130 Alkaloid 7DLGT low borderline
Srurcontig_8110417190 Alkaloid 7DLGT low borderline
Srurcontig_8470430990 Alkaloid 7DLGT low borderline
Srurcontig_8540439060 Alkaloid 7DLGT low borderline
Srurcontig_8550440190 Alkaloid 7DLGT medium pass
Srurcontig_8560440500 Alkaloid 7DLGT low borderline
Srurcontig_8660446690 Alkaloid 7DLGT medium pass
Srurcontig_9130468010 Alkaloid 7DLGT low borderline
Srurcontig_9870498770 Alkaloid 7DLGT medium pass
Srurcontig_9900500800 Alkaloid 7DLGT low borderline
Srurcontig_9900500920 Alkaloid 7DLGT medium pass
Srurcontig_10080006840 Alkaloid 7DLH low borderline
Srurcontig_10580023680 Alkaloid 7DLH medium borderline
Srurcontig_10960043360 Alkaloid 7DLH medium borderline
Srurcontig_1710083330 Alkaloid 7DLH low borderline
Srurcontig_1710083360 Alkaloid 7DLH medium borderline
Srurcontig_1710083390 Alkaloid 7DLH medium borderline
Srurcontig_2830135560 Alkaloid 7DLH medium borderline
Srurcontig_3720182190 Alkaloid 7DLH medium borderline
Srurcontig_4220207940 Alkaloid 7DLH medium borderline
Srurcontig_4220207950 Alkaloid 7DLH medium borderline
Srurcontig_5040247760 Alkaloid 7DLH low borderline
Srurcontig_5330263050 Alkaloid 7DLH medium borderline
Srurcontig_5350264420 Alkaloid 7DLH medium borderline
Srurcontig_5710293950 Alkaloid 7DLH medium borderline
Srurcontig_5710293980 Alkaloid 7DLH medium borderline
Srurcontig_5710293990 Alkaloid 7DLH medium borderline
Srurcontig_600303120 Alkaloid 7DLH medium borderline
Srurcontig_6290318500 Alkaloid 7DLH medium borderline
Srurcontig_6290318560 Alkaloid 7DLH medium borderline
Srurcontig_6290318590 Alkaloid 7DLH low borderline
Srurcontig_6290319690 Alkaloid 7DLH medium borderline
Srurcontig_7020351570 Alkaloid 7DLH medium borderline
Srurcontig_9260475340 Alkaloid 7DLH medium borderline
Srurcontig_1070028790 Alkaloid 8HGO medium borderline
Srurcontig_11180058510 Alkaloid 8HGO medium borderline