PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Srurcontig_2400117070 Flavonoid ANR medium borderline
Srurcontig_2690129040 Flavonoid ANR medium borderline
Srurcontig_2690129050 Flavonoid ANR medium borderline
Srurcontig_3460169080 Flavonoid ANR low borderline
Srurcontig_3590176920 Flavonoid ANR low borderline
Srurcontig_3700180880 Flavonoid ANR low borderline
Srurcontig_3910193830 Flavonoid ANR medium borderline
Srurcontig_3910193840 Flavonoid ANR medium borderline
Srurcontig_3910197670 Flavonoid ANR medium borderline
Srurcontig_4470220410 Flavonoid ANR low borderline
Srurcontig_5530282680 Flavonoid ANR low borderline
Srurcontig_5990302510 Flavonoid ANR low borderline
Srurcontig_6020304280 Flavonoid ANR low borderline
Srurcontig_7050352550 Flavonoid ANR medium borderline
Srurcontig_7060353100 Flavonoid ANR medium borderline
Srurcontig_7340362000 Flavonoid ANR medium borderline
Srurcontig_8820451400 Flavonoid ANR medium borderline
Srurcontig_9130468400 Flavonoid ANR medium borderline
Srurcontig_2680128940 Flavonoid ANS/LDOX medium borderline
Srurcontig_2680128980 Flavonoid ANS/LDOX medium borderline
Srurcontig_4470220340 Flavonoid ANS/LDOX low borderline
Srurcontig_5080249310 Flavonoid ANS/LDOX low borderline
Srurcontig_5990302560 Flavonoid ANS/LDOX medium borderline
Srurcontig_8380427560 Flavonoid ANS/LDOX medium borderline
Srurcontig_8380427610 Flavonoid ANS/LDOX medium borderline
Srurcontig_1770085040 Flavonoid C4H low borderline
Srurcontig_2710129680 Flavonoid C4H medium pass
Srurcontig_3150151100 Flavonoid C4H low borderline
Srurcontig_3150151110 Flavonoid C4H low borderline
Srurcontig_3490170930 Flavonoid C4H low borderline
Srurcontig_4110204060 Flavonoid C4H low borderline
Srurcontig_4550226170 Flavonoid C4H low borderline
Srurcontig_4740238410 Flavonoid C4H low borderline
Srurcontig_5020246930 Flavonoid C4H low borderline
Srurcontig_7270359450 Flavonoid C4H medium borderline
Srurcontig_7270359470 Flavonoid C4H medium borderline
Srurcontig_7460366310 Flavonoid C4H medium borderline
Srurcontig_7460366330 Flavonoid C4H medium borderline
Srurcontig_7950407090 Flavonoid C4H medium borderline
Srurcontig_7950407120 Flavonoid C4H medium borderline
Srurcontig_8520437340 Flavonoid C4H medium borderline
Srurcontig_9370480550 Flavonoid C4H low borderline
Srurcontig_10000001280 Flavonoid CHI low borderline
Srurcontig_2310114710 Flavonoid CHI low borderline
Srurcontig_3060145030 Flavonoid CHI low borderline
Srurcontig_5520278170 Flavonoid CHI medium pass
Srurcontig_7480366900 Flavonoid CHI medium pass
Srurcontig_10080006350 Flavonoid CHS medium pass
Srurcontig_10390018480 Flavonoid CHS medium pass
Srurcontig_10390018520 Flavonoid CHS medium pass