PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Srurcontig_5440275260 Alkaloid CODM/T6ODM medium borderline
Srurcontig_6160310010 Alkaloid CODM/T6ODM medium borderline
Srurcontig_630321260 Alkaloid CODM/T6ODM medium borderline
Srurcontig_630321610 Alkaloid CODM/T6ODM medium borderline
Srurcontig_660339130 Alkaloid CODM/T6ODM medium borderline
Srurcontig_6860347440 Alkaloid CODM/T6ODM medium borderline
Srurcontig_7560378460 Alkaloid CODM/T6ODM medium borderline
Srurcontig_7570380040 Alkaloid CODM/T6ODM medium borderline
Srurcontig_8040411930 Alkaloid CODM/T6ODM medium borderline
Srurcontig_8040411940 Alkaloid CODM/T6ODM medium borderline
Srurcontig_8380427560 Alkaloid CODM/T6ODM medium borderline
Srurcontig_8380427610 Alkaloid CODM/T6ODM medium borderline
Srurcontig_8510436920 Alkaloid CODM/T6ODM medium borderline
Srurcontig_8840452220 Alkaloid CODM/T6ODM medium borderline
Srurcontig_9010461790 Alkaloid CODM/T6ODM medium borderline
Srurcontig_9020462330 Alkaloid CODM/T6ODM medium borderline
Srurcontig_10700029520 Alkaloid COR medium pass
Srurcontig_2470122560 Alkaloid COR medium pass
Srurcontig_3510172920 Alkaloid COR medium pass
Srurcontig_510252210 Alkaloid COR medium pass
Srurcontig_5190257520 Alkaloid COR medium pass
Srurcontig_5520279980 Alkaloid COR medium pass
Srurcontig_5820297810 Alkaloid COR medium pass
Srurcontig_590299400 Alkaloid COR medium pass
Srurcontig_6900348900 Alkaloid COR medium pass
Srurcontig_7190357390 Alkaloid COR medium pass
Srurcontig_7870401620 Alkaloid COR medium pass
Srurcontig_8040412140 Alkaloid COR medium pass
Srurcontig_9780495540 Alkaloid COR medium pass
Srurcontig_3910193590 Alkaloid CYP719 medium borderline
Srurcontig_6730343350 Alkaloid CYP719 low borderline
Srurcontig_6840345890 Alkaloid CYP719 low borderline
Srurcontig_9250475170 Alkaloid CYP719 medium borderline
Srurcontig_1770085040 Alkaloid CYP80B1 medium borderline
Srurcontig_2830135060 Alkaloid CYP80B1 medium borderline
Srurcontig_3150151100 Alkaloid CYP80B1 low borderline
Srurcontig_3150151110 Alkaloid CYP80B1 low borderline
Srurcontig_3170151640 Alkaloid CYP80B1 medium borderline
Srurcontig_3170151730 Alkaloid CYP80B1 low borderline
Srurcontig_3270157940 Alkaloid CYP80B1 medium borderline
Srurcontig_3490170930 Alkaloid CYP80B1 medium borderline
Srurcontig_4360215020 Alkaloid CYP80B1 medium borderline
Srurcontig_4610231930 Alkaloid CYP80B1 medium borderline
Srurcontig_5350266060 Alkaloid CYP80B1 low borderline
Srurcontig_5520279260 Alkaloid CYP80B1 low borderline
Srurcontig_5660288810 Alkaloid CYP80B1 medium borderline
Srurcontig_6070305370 Alkaloid CYP80B1 medium borderline
Srurcontig_780396910 Alkaloid CYP80B1 medium borderline
Srurcontig_7970407480 Alkaloid CYP80B1 medium borderline
Srurcontig_8950457420 Alkaloid CYP80B1 medium borderline