PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Srurcontig_2030104500 Steroid CPI1 high pass
Srurcontig_2400118440 Steroid CYP51G1 medium borderline
Srurcontig_10530022630 Steroid CYP90D1 low borderline
Srurcontig_1710083360 Steroid CYP90D1 low borderline
Srurcontig_1710083390 Steroid CYP90D1 low borderline
Srurcontig_370179950 Steroid CYP90D1 low borderline
Srurcontig_4220207950 Steroid CYP90D1 low borderline
Srurcontig_5430274840 Steroid CYP90D1 low borderline
Srurcontig_5710293990 Steroid CYP90D1 low borderline
Srurcontig_600303120 Steroid CYP90D1 low borderline
Srurcontig_6290318500 Steroid CYP90D1 low borderline
Srurcontig_6290318560 Steroid CYP90D1 low borderline
Srurcontig_6290319690 Steroid CYP90D1 low borderline
Srurcontig_8100415760 Steroid CYP90D1 low borderline
Srurcontig_8690447470 Steroid CYP90D1 low borderline
Srurcontig_930476900 Steroid CYP90D1 low borderline
Srurcontig_9800496680 Steroid CYP90D1 low borderline
Srurcontig_9960503360 Steroid CYP90D1 low borderline
Srurcontig_10070005160 Steroid DET2 low borderline
Srurcontig_10440020100 Steroid DET2 low borderline
Srurcontig_11180055940 Steroid DET2 medium pass
Srurcontig_2060105600 Steroid DET2 low borderline
Srurcontig_3900193220 Steroid DET2 low borderline
Srurcontig_4180206840 Steroid DET2 low borderline
Srurcontig_4790239240 Steroid DET2 low borderline
Srurcontig_6540336140 Steroid DET2 low borderline
Srurcontig_7580384830 Steroid DET2 medium pass
Srurcontig_7620391110 Steroid DET2 low borderline
Srurcontig_9000459830 Steroid DET2 low borderline
Srurcontig_1900092560 Steroid DWF1 medium pass
Srurcontig_4230208400 Steroid DWF1 low borderline
Srurcontig_10070005630 Steroid DWF4/CYP90B1 low borderline
Srurcontig_10080006330 Steroid DWF4/CYP90B1 low borderline
Srurcontig_10080006870 Steroid DWF4/CYP90B1 low borderline
Srurcontig_10090008190 Steroid DWF4/CYP90B1 low borderline
Srurcontig_10320017140 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_10580023680 Steroid DWF4/CYP90B1 low borderline
Srurcontig_10870039400 Steroid DWF4/CYP90B1 low borderline
Srurcontig_10960043370 Steroid DWF4/CYP90B1 low borderline
Srurcontig_11180058330 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_11180058790 Steroid DWF4/CYP90B1 low borderline
Srurcontig_1420075310 Steroid DWF4/CYP90B1 low borderline
Srurcontig_1790085380 Steroid DWF4/CYP90B1 low borderline
Srurcontig_200099520 Steroid DWF4/CYP90B1 medium borderline
Srurcontig_2030103380 Steroid DWF4/CYP90B1 low borderline
Srurcontig_2140108440 Steroid DWF4/CYP90B1 low borderline
Srurcontig_2430121050 Steroid DWF4/CYP90B1 low borderline
Srurcontig_2680128990 Steroid DWF4/CYP90B1 low borderline
Srurcontig_2680129010 Steroid DWF4/CYP90B1 low borderline
Srurcontig_2830135060 Steroid DWF4/CYP90B1 low borderline