PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_9300478340 Alkaloid CYP80B1 medium borderline
Srurcontig_930476190 Alkaloid CYP80B1 medium borderline
Srurcontig_950483620 Alkaloid CYP80B1 medium borderline
Srurcontig_3150151070 Alkaloid CYP80F1 medium borderline
Srurcontig_10090008040 Alkaloid G8O/G8H medium borderline
Srurcontig_10230013340 Alkaloid G8O/G8H medium borderline
Srurcontig_10370017840 Alkaloid G8O/G8H medium borderline
Srurcontig_10530022630 Alkaloid G8O/G8H medium borderline
Srurcontig_10840037930 Alkaloid G8O/G8H medium borderline
Srurcontig_10880039670 Alkaloid G8O/G8H medium borderline
Srurcontig_2030104130 Alkaloid G8O/G8H medium borderline
Srurcontig_2070105740 Alkaloid G8O/G8H low borderline
Srurcontig_2140108430 Alkaloid G8O/G8H medium borderline
Srurcontig_2340115680 Alkaloid G8O/G8H medium borderline
Srurcontig_2710131070 Alkaloid G8O/G8H medium borderline
Srurcontig_3150151060 Alkaloid G8O/G8H medium borderline
Srurcontig_370179950 Alkaloid G8O/G8H medium borderline
Srurcontig_3890187780 Alkaloid G8O/G8H medium borderline
Srurcontig_3890187790 Alkaloid G8O/G8H medium borderline
Srurcontig_3890189130 Alkaloid G8O/G8H low borderline
Srurcontig_3910196900 Alkaloid G8O/G8H medium borderline
Srurcontig_4720237570 Alkaloid G8O/G8H medium borderline
Srurcontig_4740238410 Alkaloid G8O/G8H low borderline
Srurcontig_5430274840 Alkaloid G8O/G8H medium borderline
Srurcontig_6080306530 Alkaloid G8O/G8H low borderline
Srurcontig_7260359310 Alkaloid G8O/G8H medium pass
Srurcontig_7270359400 Alkaloid G8O/G8H low borderline
Srurcontig_7270359450 Alkaloid G8O/G8H medium borderline
Srurcontig_7270359470 Alkaloid G8O/G8H medium borderline
Srurcontig_7400363770 Alkaloid G8O/G8H medium borderline
Srurcontig_7460366310 Alkaloid G8O/G8H medium borderline
Srurcontig_7590386770 Alkaloid G8O/G8H medium borderline
Srurcontig_7920405580 Alkaloid G8O/G8H medium pass
Srurcontig_7920405870 Alkaloid G8O/G8H medium borderline
Srurcontig_7920405890 Alkaloid G8O/G8H medium pass
Srurcontig_7950407090 Alkaloid G8O/G8H medium borderline
Srurcontig_7950407120 Alkaloid G8O/G8H medium borderline
Srurcontig_8380427550 Alkaloid G8O/G8H low borderline
Srurcontig_8490434220 Alkaloid G8O/G8H low borderline
Srurcontig_8520437340 Alkaloid G8O/G8H medium borderline
Srurcontig_8690447470 Alkaloid G8O/G8H medium borderline
Srurcontig_9300478320 Alkaloid G8O/G8H medium borderline
Srurcontig_930476900 Alkaloid G8O/G8H medium borderline
Srurcontig_9800496680 Alkaloid G8O/G8H medium borderline
Srurcontig_9870498890 Alkaloid G8O/G8H low borderline
Srurcontig_9870498930 Alkaloid G8O/G8H low borderline
Srurcontig_9930501490 Alkaloid G8O/G8H low borderline
Srurcontig_9970503480 Alkaloid G8O/G8H medium borderline
Srurcontig_9980503850 Alkaloid G8O/G8H medium borderline
Srurcontig_7480366870 Alkaloid GES low borderline