PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_10070005270 Alkaloid GS medium pass
Srurcontig_10380017930 Alkaloid GS low borderline
Srurcontig_10440020150 Alkaloid GS medium pass
Srurcontig_10630024620 Alkaloid GS high pass
Srurcontig_11120049690 Alkaloid GS low borderline
Srurcontig_11170053930 Alkaloid GS low borderline
Srurcontig_1290067210 Alkaloid GS low borderline
Srurcontig_1290067280 Alkaloid GS low borderline
Srurcontig_1420075760 Alkaloid GS low borderline
Srurcontig_1900092280 Alkaloid GS medium pass
Srurcontig_2300114330 Alkaloid GS medium pass
Srurcontig_2340115520 Alkaloid GS medium pass
Srurcontig_2340115610 Alkaloid GS low borderline
Srurcontig_2400117660 Alkaloid GS low borderline
Srurcontig_2470122480 Alkaloid GS low borderline
Srurcontig_2470122530 Alkaloid GS low borderline
Srurcontig_2960140700 Alkaloid GS low borderline
Srurcontig_3280158310 Alkaloid GS low borderline
Srurcontig_3400165580 Alkaloid GS high pass
Srurcontig_3460169040 Alkaloid GS low borderline
Srurcontig_3540175360 Alkaloid GS low borderline
Srurcontig_3560176250 Alkaloid GS low borderline
Srurcontig_3900190310 Alkaloid GS low borderline
Srurcontig_3900193180 Alkaloid GS medium pass
Srurcontig_450223650 Alkaloid GS high pass
Srurcontig_450223660 Alkaloid GS medium pass
Srurcontig_4550226040 Alkaloid GS medium pass
Srurcontig_4550226080 Alkaloid GS low borderline
Srurcontig_4710237470 Alkaloid GS high pass
Srurcontig_4930244840 Alkaloid GS low borderline
Srurcontig_5660289390 Alkaloid GS high pass
Srurcontig_5750296020 Alkaloid GS low borderline
Srurcontig_6020304080 Alkaloid GS low borderline
Srurcontig_60302990 Alkaloid GS high pass
Srurcontig_6030304570 Alkaloid GS low borderline
Srurcontig_6170310560 Alkaloid GS low borderline
Srurcontig_6190311210 Alkaloid GS low borderline
Srurcontig_6290317110 Alkaloid GS low borderline
Srurcontig_6330323260 Alkaloid GS low borderline
Srurcontig_6460330510 Alkaloid GS medium pass
Srurcontig_6580337050 Alkaloid GS low borderline
Srurcontig_6580337100 Alkaloid GS low borderline
Srurcontig_6900348870 Alkaloid GS low borderline
Srurcontig_750367830 Alkaloid GS medium pass
Srurcontig_7560375140 Alkaloid GS low borderline
Srurcontig_7590385700 Alkaloid GS medium pass
Srurcontig_7620391070 Alkaloid GS medium pass
Srurcontig_780396730 Alkaloid GS low borderline
Srurcontig_8070413050 Alkaloid GS low borderline
Srurcontig_850436610 Alkaloid GS low borderline